Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02583 and RBAM_015530
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:25
# Commandline: needle
# -asequence dna-align/BSNT_02583___yloI.1.9828.seq
# -bsequence dna-align/RBAM_015530___yloI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02583___yloI-RBAM_015530___yloI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02583___yloI-RBAM_015530___yloI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02583___yloI
# 2: RBAM_015530___yloI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1251
# Identity: 925/1251 (73.9%)
# Similarity: 925/1251 (73.9%)
# Gaps: 60/1251 ( 4.8%)
# Score: 3304.5
#
#
#=======================================
BSNT_02583___ 1 TTGCTAAACAATCGAAATGTGTTACTTTGCGTGAGCGGAGGCATCGCTGT 50
.|.||.||.|||||..|.||.||.|||||.||||||||.||.||.||
RBAM_015530__ 1 ---ATGAAAAACCGAAACATTTTGCTATGCGTAAGCGGAGGAATTGCCGT 47
BSNT_02583___ 51 TTATAAAGCCTGTGCGTTAACAAGCAAGCTGGTTCAGGCAGGAGCAAATG 100
|||||||||.|..||..|.||.|||||||||||||||||.||.|||||.|
RBAM_015530__ 48 TTATAAAGCTTCCGCACTCACGAGCAAGCTGGTTCAGGCCGGCGCAAACG 97
BSNT_02583___ 101 TCAAAGTGATTATGACTGAATCCGCTTGC-CGA-TTCGTTTCACCGCTGA 148
|||||||||||||||||||.||||| || .|| ||.|||||.|||||||
RBAM_015530__ 98 TCAAAGTGATTATGACTGAGTCCGC--GCGTGAGTTTGTTTCTCCGCTGA 145
BSNT_02583___ 149 CATTTCAGGCATTGAGCCGCCACGAAGTCTATACAGATACATTTAAAGAA 198
||||||||||..|||||||..|.|||||.|||||||||||||||||.|||
RBAM_015530__ 146 CATTTCAGGCGCTGAGCCGGAATGAAGTGTATACAGATACATTTAATGAA 195
BSNT_02583___ 199 CAAAATCC-AAGCGTCATTTCTCATATTGATGCCGCAGACTGGGCCGACT 247
|||||||| ||| ||.||||||||||||||||||||.||||||||.||.|
RBAM_015530__ 196 CAAAATCCGAAG-GTGATTTCTCATATTGATGCCGCTGACTGGGCGGATT 244
BSNT_02583___ 248 TGATTATCGTAGCGCCGGCTACGGCTAATGTGATTGGAAAACTGGCAAAC 297
|.|||||.||.|||||.||||||||.|||.|.||.||.||.||.||.|||
RBAM_015530__ 245 TAATTATTGTCGCGCCCGCTACGGCAAATATCATCGGCAAGCTTGCCAAC 294
BSNT_02583___ 298 GGCATCGCTGATGATATGCTGACGACAACATTGTTGGCAGCAACGGCTCC 347
||.||.|||||.||||||||.||.||.||..||.||||.||...|||.||
RBAM_015530__ 295 GGAATTGCTGACGATATGCTCACAACGACGGTGCTGGCGGCTGAGGCCCC 344
BSNT_02583___ 348 CGTTTGGATCGCGCCGGCGATGAACGTTCATATGTATGACCACCCGGCAG 397
.||||||.|.|||||.||||||||.||.|||||||||||.||.|||||.|
RBAM_015530__ 345 GGTTTGGGTGGCGCCTGCGATGAATGTCCATATGTATGATCATCCGGCGG 394
BSNT_02583___ 398 TCAAACGAAACATTTCTGTTCTTTATCAGGACGGTTATCGTTTTATTGAG 447
|.|||||.|||||.|||||.||||||||||||||....||.|||||.|||
RBAM_015530__ 395 TGAAACGGAACATCTCTGTGCTTTATCAGGACGGGGTCCGCTTTATCGAG 444
BSNT_02583___ 448 CCAAGTGAGGGCTATTTAGCATGCGGTTACGTAGGAAAAGGCAGATTGGA 497
||.|||||.||||||||.||||||||.||.||.||.|||||.||..||||
RBAM_015530__ 445 CCGAGTGAAGGCTATTTGGCATGCGGATATGTCGGCAAAGGAAGGCTGGA 494
BSNT_02583___ 498 AGAGCCGGAAAACATCGTAAAGC-TGGCCGAAAAACATTTT------GCT 540
.||||||||....||.||..||| ||.|.| |.|.|||||| .||
RBAM_015530__ 495 GGAGCCGGAGCTTATTGTTGAGCGTGTCAG-AGAGCATTTTAAGGAGCCT 543
BSNT_02583___ 541 GAAGAAAC-ATCCGCTCCTTTAG-AAGGCAAGCATGTGGTCATTACAGCC 588
|||| || ||.|||..|| | ||||.||.|||.|.||||||||.|||
RBAM_015530__ 544 GAAG--ACGATGCGCCGCT---GAAAGGAAAACATATTGTCATTACGGCC 588
BSNT_02583___ 589 GGCCCAACGCGGGAAGCGGTTGATCCCGTCCGGTTTTTTACCAATAAATC 638
||.||.|||||.|||||.||.||.||.|||||.||.||.||.||||||||
RBAM_015530__ 589 GGTCCGACGCGCGAAGCCGTGGACCCTGTCCGCTTCTTCACAAATAAATC 638
BSNT_02583___ 639 GACGGGCAAAATGGGCTACGCATTAGCGGAGGCTGCTGTTCAGCTCGGCG 688
.||.|||||||||||||||||....||.||.||.||.||.|..|||||.|
RBAM_015530__ 639 CACCGGCAAAATGGGCTACGCCGCTGCTGAAGCCGCCGTCCGTCTCGGGG 688
BSNT_02583___ 689 CACGGGTAACCTTAATTTCTGGGCCTGTTTCACTTGATCAGCCTAAAGGC 738
|.|||||.||..|.|||||.||.||.||.|||.|.||.|.||| .|.
RBAM_015530__ 689 CGCGGGTGACGCTGATTTCAGGCCCGGTGTCAATAGAGCCGCC----AGT 734
BSNT_02583___ 739 CTTGCTG----AGTTTATCCCTGTTCAATCGGCTGCGGATATGCGCGAAG 784
|..|||| |||||.|.|||||.||||||||.||.||||||.|.||||
RBAM_015530__ 735 CGGGCTGTATCAGTTTCTTCCTGTGCAATCGGCAGCCGATATGAGAGAAG 784
BSNT_02583___ 785 CTGTGCTCTCTGTGTATGACGCAAGTGATATAGTCATTAAAACAGCTGCG 834
|.|||||.|||||||.|||..||.|.||.||.||.|||||.||.||.||.
RBAM_015530__ 785 CCGTGCTTTCTGTGTTTGATTCATGCGACATGGTGATTAAGACGGCGGCC 834
BSNT_02583___ 835 GTAGCCGATTTTACGCCGAAAACAGTATTTGACCATAAAATGAAAAAACA 884
||.|||||||||||||||....|.||.|.|||.||.||||||||.||..|
RBAM_015530__ 835 GTGGCCGATTTTACGCCGGCGGCTGTTTCTGATCACAAAATGAAGAAGAA 884
BSNT_02583___ 885 AGACGG--CG-GCATGACCTTAGAATTGAAAAGAACAGTCGATATTTTGA 931
|||||| || .|.||| |.|||||.||..|.||.|..||.||..|||
RBAM_015530__ 885 AGACGGTTCGCTCGTGA---TCGAATTCAACCGTACGGCAGACATACTGA 931
BSNT_02583___ 932 AAGAATTGGGCGA---GAAAAAGAAAGAGCAGATTTTGGTCGGATTTGCC 978
|||||.|.||||| |||| |.|.|.|||.|..|||||||||||||.
RBAM_015530__ 932 AAGAACTCGGCGAACGGAAA---ACACACCAGCTGCTGGTCGGATTTGCG 978
BSNT_02583___ 979 GCCGAAACACAAGACATTGAACACTATGCACGTAAAAAGCTCG--CCGCT 1026
||.|||||.||||||.|.||||.||||||.||.|.|||.|||| |.|
RBAM_015530__ 979 GCTGAAACGCAAGACGTCGAACGCTATGCGCGCAGAAAACTCGAACAG-- 1026
BSNT_02583___ 1027 AAAAACCTTGATTTGATTGTGGCAAATGATGTGAAAGCAAATGGGGCCGG 1076
||||||||||||.||||.||.||.|||||||||||||||.|.||||||||
RBAM_015530__ 1027 AAAAACCTTGATATGATCGTTGCGAATGATGTGAAAGCAGAAGGGGCCGG 1076
BSNT_02583___ 1077 TTTTGGTGCTGATACGAATATCGTGACAATCTTTTTCAAAGACGGGCATA 1126
.|||||..|.|||||||||.||||.||..|||.||||...|||||....|
RBAM_015530__ 1077 ATTTGGCACGGATACGAATGTCGTCACCTTCTATTTCCGGGACGGAAGAA 1126
BSNT_02583___ 1127 AACGCGAACTCCCGATTATGTCTAAGCTCGATGTTTCTTTTGAAATCCTT 1176
||||.||.||..||.||||||||||.||.||.|||||.||||||||.||.
RBAM_015530__ 1127 AACGGGAGCTTGCGCTTATGTCTAAACTTGACGTTTCCTTTGAAATGCTG 1176
BSNT_02583___ 1177 CAGGAGATCGCAGACCTCTCAAAACAAACCGGAGAGCG------CTCATG 1220
.||||.|| ||||.||...| ||.||||.||.|| |..|||
RBAM_015530__ 1177 AAGGAAAT----GACCGCTTTGA--AAGCCGGGGACCGAAAACCCGTATG 1220
BSNT_02583___ 1221 A 1221
|
RBAM_015530__ 1221 A 1221
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