Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02601 and RBAM_015690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:27
# Commandline: needle
# -asequence dna-align/BSNT_02601___sdaAA.1.9828.seq
# -bsequence dna-align/RBAM_015690___sdaAA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02601___sdaAA-RBAM_015690___sdaAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02601___sdaAA-RBAM_015690___sdaAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02601___sdaAA
# 2: RBAM_015690___sdaAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 905
# Identity: 718/905 (79.3%)
# Similarity: 718/905 (79.3%)
# Gaps: 4/905 ( 0.4%)
# Score: 2837.0
#
#
#=======================================
BSNT_02601___ 1 ATGTTTCGTAATGTAAAAGAATTAATTGAGATTACTAAAGAAAAACAAAT 50
||||||||||||||||||||||||||.||.||.|||.|||||||||||||
RBAM_015690__ 1 ATGTTTCGTAATGTAAAAGAATTAATAGAAATCACTCAAGAAAAACAAAT 50
BSNT_02601___ 51 ATTGATCTCTGATGTGATGATAGCTCAAGAGATGGAAGTAACAGAAAAAA 100
...|||.||.||.||||||||..|.||||||||||||||.||..||||||
RBAM_015690__ 51 TCCGATTTCGGAAGTGATGATCACCCAAGAGATGGAAGTGACGCAAAAAA 100
BSNT_02601___ 101 CAAAAGAGGACATTTTTCAGCAG--ATGGATCATAACCTGTCTGTTATGG 148
|....||.||.||.||||| || |||||.|..||.||.||.||.||||
RBAM_015690__ 101 CGCGGGAAGAAATCTTTCA--AGGAATGGAGCGCAATCTCTCCGTCATGG 148
BSNT_02601___ 149 AAGCGGCGGTTCAGAAAGGACTCGAGGGAGTTACGAGCCAAACGGGCTTA 198
||||.||.|||.|.|||||.||..||||.||.|||||.||.||.||.|||
RBAM_015690__ 149 AAGCAGCTGTTGAAAAAGGGCTGAAGGGCGTCACGAGTCAGACCGGTTTA 198
BSNT_02601___ 199 ACAGGCGGAGATGCCGTTAAATTGCAGGCCTATATTCGATCAGGAAAAAG 248
|||||||||||||||||.|||.|.|||||.||.||.|.|||.||||.|||
RBAM_015690__ 199 ACAGGCGGAGATGCCGTGAAACTTCAGGCATACATCCAATCGGGAAGAAG 248
BSNT_02601___ 249 CCTGTCTGGCCCGCTGATTTTAGATGCTGTATCGAAAGCCGTTGCAACAA 298
||||||.|||...|||||||||||.||.||.||.|||||.||.||.||||
RBAM_015690__ 249 CCTGTCGGGCAATCTGATTTTAGACGCCGTTTCTAAAGCTGTGGCGACAA 298
BSNT_02601___ 299 ATGAAGTAAATGCAGCAATGGGAACCATCTGTGCGACACCGACTGCAGGT 348
|||||||.|||||.||.||||||||.|||||.||.|||||||||||.||.
RBAM_015690__ 299 ATGAAGTCAATGCGGCGATGGGAACGATCTGCGCTACACCGACTGCCGGC 348
BSNT_02601___ 349 TCTGCCGGTGTGGTGCCCGGTACGTTATTTGCTGTAAAAGAAAAGCTGAA 398
||||||||.||.|||||.||.||||||||.||.|||||..|.||||||.|
RBAM_015690__ 349 TCTGCCGGGGTCGTGCCGGGAACGTTATTCGCCGTAAAGCATAAGCTGCA 398
BSNT_02601___ 399 TCCAACAAGAGAACAAATGATCCGCTTTTTGTTTACGGCCGGGGCTTTCG 448
.||.||.|.|||||||||||||||.|||.|||||||.|||||.||.||||
RBAM_015690__ 399 CCCTACGACAGAACAAATGATCCGTTTTCTGTTTACAGCCGGCGCGTTCG 448
BSNT_02601___ 449 GATTTGTCGTGGCTAATAACGCAAGCATTTCCGGCGCCGCCGGAGGATGT 498
|.||||||||.||.|||||.||.||.|||||.||.||.||.|||||.|||
RBAM_015690__ 449 GTTTTGTCGTAGCAAATAATGCGAGTATTTCAGGAGCGGCAGGAGGCTGT 498
BSNT_02601___ 499 CAGGCAGAGGTTGGATCAGCTTCAGGCATGGCGGCTGCGGCCATTGTTGA 548
|||||.||.||.||.|||||.|||||||||||.||.||.||.|||||.||
RBAM_015690__ 499 CAGGCGGAAGTCGGGTCAGCATCAGGCATGGCAGCGGCTGCGATTGTGGA 548
BSNT_02601___ 549 AATGGCAGGAGGAACACCCGAACAAAGCGCGGAAGCCATGGCCATTACAT 598
||||||.||.|||||.||..|.|||...||||||||.|||||.||||||.
RBAM_015690__ 549 AATGGCGGGCGGAACGCCTCAGCAATCAGCGGAAGCAATGGCGATTACAC 598
BSNT_02601___ 599 TAAAAAATATGCTAGGCCTCGTGTGCGACCCTGTTGCAGGGCTTGTTGAG 648
|.|||||||||||.||.|||||.||.|||||.||.||.||..|.||.||.
RBAM_015690__ 599 TGAAAAATATGCTCGGTCTCGTATGTGACCCGGTCGCCGGATTGGTAGAA 648
BSNT_02601___ 649 GTGCCTTGCGTGAAACGGAATGCGATGGGCGCGTCAAATGCAATGATTGC 698
|||||.||.||.|||||.||.||.|||||.||.||.||.||||||||.||
RBAM_015690__ 649 GTGCCGTGTGTCAAACGAAACGCAATGGGAGCATCCAACGCAATGATCGC 698
BSNT_02601___ 699 CGCTGATATGGCATTGGCGGGCATTACAAGCCGTATTCCATGTGATGAGG 748
.||.||||||||..||||.||.|||||||||||.|||||.||.|||||||
RBAM_015690__ 699 GGCGGATATGGCGCTGGCCGGGATTACAAGCCGCATTCCTTGCGATGAGG 748
BSNT_02601___ 749 TTATCGATGCCATGTATAAAATAGGCCAAACGATGCCAACTGCACTTAGA 798
|.||.||.||.|||||.|||||.|||||.||.|||||.||.||.||..|.
RBAM_015690__ 749 TGATTGACGCGATGTACAAAATCGGCCAGACAATGCCGACAGCTCTGCGT 798
BSNT_02601___ 799 GAAACAGGCCAGGGCGGTTTAGCGGCAACACCGACAGGAAGAGAATTAGA 848
|||||.||.||.|||||||||||.||.||||||||.||||||||||||||
RBAM_015690__ 799 GAAACGGGACAAGGCGGTTTAGCCGCGACACCGACGGGAAGAGAATTAGA 848
BSNT_02601___ 849 GAAAAAAATTTTCGGAGGAGCGCTAGGTTCACGTGAAACAACATCAGCAA 898
||||||||||||||||||||||||....|||.||||.|||.|||||||||
RBAM_015690__ 849 GAAAAAAATTTTCGGAGGAGCGCTGAAATCAAGTGACACACCATCAGCAA 898
BSNT_02601___ 899 ACTAG 903
|||||
RBAM_015690__ 899 ACTAG 903
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