Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02608 and RBAM_015760
See
Amino acid alignment /
Visit
BSNT_02608 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:28
# Commandline: needle
# -asequence dna-align/BSNT_02608___rnc.1.9828.seq
# -bsequence dna-align/RBAM_015760___rnc.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02608___rnc-RBAM_015760___rnc.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02608___rnc-RBAM_015760___rnc.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02608___rnc
# 2: RBAM_015760___rnc
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 753
# Identity: 649/753 (86.2%)
# Similarity: 649/753 (86.2%)
# Gaps: 6/753 ( 0.8%)
# Score: 2812.0
#
#
#=======================================
BSNT_02608___ 1 ATGTCAAAACACTCACATTATAAAGATAAAAAAAAGTTCTATAAAAAAGT 50
|||||||||||||||||||.||||||||||||||||||||||||||||.|
RBAM_015760__ 1 ATGTCAAAACACTCACATTTTAAAGATAAAAAAAAGTTCTATAAAAAAAT 50
BSNT_02608___ 51 AGAACAATTTAAAGAGTTTCAAGAACGGATTTCGGTTCACTTTCAAAATG 100
|||.||||||||||||||.||||||||||||||||||||.||||||||.|
RBAM_015760__ 51 AGAGCAATTTAAAGAGTTCCAAGAACGGATTTCGGTTCATTTTCAAAACG 100
BSNT_02608___ 101 AAAAGCTTTTGTATCAAGCATTTACACATTCATCTTATGTGAATGAGCAT 150
|.||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_015760__ 101 AGAAACTTTTGTATCAAGCATTTACACATTCATCTTATGTGAATGAGCAT 150
BSNT_02608___ 151 CGGAAAAAGCCGTATGAAGATAATGAAAGGCTTGAATTTTTAGGTGACGC 200
||||||||||||||||||||.|||||||||||||||||||||||||||||
RBAM_015760__ 151 CGGAAAAAGCCGTATGAAGACAATGAAAGGCTTGAATTTTTAGGTGACGC 200
BSNT_02608___ 201 TGTTTTGGAACTGACGATCTCCAGATTCTTATTTGCCAAATACCCGGCTA 250
||||||||||||||||||||||..||||||||||||||||||.|||||.|
RBAM_015760__ 201 TGTTTTGGAACTGACGATCTCCCAATTCTTATTTGCCAAATATCCGGCCA 250
BSNT_02608___ 251 TGAGTGAAGGAGATTTGACGAAATTGAGAGCCGCAATTGTTTGCGAACCG 300
||||||||||||||||||||||..||||||||||.||.||.|||||.|||
RBAM_015760__ 251 TGAGTGAAGGAGATTTGACGAAGCTGAGAGCCGCTATCGTATGCGAGCCG 300
BSNT_02608___ 301 TCTCTCGTTTCATTGGCTCACGAGCTGTCATTCGGCGATCTTGTCCTGTT 350
||.|||||.|||.|.||.||.||..|||||||||||||||||||.||.||
RBAM_015760__ 301 TCACTCGTCTCACTTGCCCATGAATTGTCATTCGGCGATCTTGTTCTCTT 350
BSNT_02608___ 351 GGGTAAAGGCGAGGAAATGACAGGCGGAAGAAAGCGTCCTGCTCTATTGG 400
|||.|||||.||.||||||||.|||||.||||||||||||||.||.||.|
RBAM_015760__ 351 GGGAAAAGGAGAAGAAATGACGGGCGGCAGAAAGCGTCCTGCGCTTTTAG 400
BSNT_02608___ 401 CGGATGTTTTTGAGGCATTTATCGGAGCCTTGTACCTTGACCAAGGATTA 450
|||||||.|||||.||.||||||||.||..||||.||.||.||.||..|.
RBAM_015760__ 401 CGGATGTGTTTGAAGCGTTTATCGGCGCACTGTATCTGGATCAGGGCCTT 450
BSNT_02608___ 451 GAGCCGGT--CGAAAGTTTCTTAAAAGTTTATGTGTTCCCTAAAATTAAC 498
||.||||| .|.|| |||.|.|||||.||.||||||||||||||.|||
RBAM_015760__ 451 GACCCGGTTCAGCAA--TTCCTGAAAGTGTACGTGTTCCCTAAAATAAAC 498
BSNT_02608___ 499 GATGGTGCTTTTTCTCATGTGATGGATTTCAAAAGCCAGCTGCAGGAATA 548
|||||||||||||||||||||||||||||||||||||||||.||.||||.
RBAM_015760__ 499 GATGGTGCTTTTTCTCATGTGATGGATTTCAAAAGCCAGCTTCAAGAATT 548
BSNT_02608___ 549 CGTGCAGCGGGACGGCAAAGGCTCTCTGGAGTATAAAATCTC-CAACGAA 597
.||.|||||||||||.|||||.||.||.|||||.||||| || |||.|||
RBAM_015760__ 549 TGTACAGCGGGACGGAAAAGGATCGCTTGAGTACAAAAT-TCTCAATGAA 597
BSNT_02608___ 598 AAAGGACCTGCGCACAACCGTGAATTTGAAGCCATCGTATCTCTAAAAGG 647
|||||.|||||.||||||||.|||||.||.||..|.||.||.||.|||||
RBAM_015760__ 598 AAAGGGCCTGCCCACAACCGGGAATTCGAGGCGCTTGTCTCCCTTAAAGG 647
BSNT_02608___ 648 TGAACCACTCGGAGTCGGAAACGGCCGTTCAAAGAAAGAAGCCGAACAGC 697
|||..|.|||||..||||.|||||.|||||.||.|||||||||||.||||
RBAM_015760__ 648 TGAGGCGCTCGGTATCGGGAACGGACGTTCCAAAAAAGAAGCCGAGCAGC 697
BSNT_02608___ 698 ACGCTGCTCAGGAAGCTTTAGCTAAATTGCAAAAACACCATACGAAACAA 747
|.||.||.|||||||||.|.||.|||.||||||||||.||||||||||||
RBAM_015760__ 698 ATGCGGCACAGGAAGCTCTTGCAAAAATGCAAAAACATCATACGAAACAA 747
BSNT_02608___ 748 TAA 750
|||
RBAM_015760__ 748 TAA 750
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.