Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02615 and RBAM_015820

See Amino acid alignment / Visit BSNT_02615 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:29
# Commandline: needle
#    -asequence dna-align/BSNT_02615___rpsP.1.9828.seq
#    -bsequence dna-align/RBAM_015820___rpsP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02615___rpsP-RBAM_015820___rpsP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02615___rpsP-RBAM_015820___rpsP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02615___rpsP
# 2: RBAM_015820___rpsP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     258/273 (94.5%)
# Similarity:   258/273 (94.5%)
# Gaps:           0/273 ( 0.0%)
# Score: 1230.0
# 
#
#=======================================

BSNT_02615___      1 ATGGCAGTAAAAATTCGTTTAAAACGTATGGGAGCAAAAAAATCTCCTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015820__      1 ATGGCAGTAAAAATTCGTTTAAAACGTATGGGAGCAAAAAAATCTCCTTT     50

BSNT_02615___     51 CTATCGTATTGTTGTAGCAGATTCTCGTTCACCACGTGACGGCCGTTTCA    100
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
RBAM_015820__     51 CTATCGTATTGTTGTAGCAGATTCTCGTTCACCGCGTGACGGCCGTTTCA    100

BSNT_02615___    101 TCGAAACAGTCGGAACTTACAACCCGGTTGCAAAACCAGCGGAAGTAAAA    150
                     |||||||||||||.||.|||||||||||||||||.||.||.|||||.|||
RBAM_015820__    101 TCGAAACAGTCGGCACATACAACCCGGTTGCAAAGCCGGCTGAAGTGAAA    150

BSNT_02615___    151 ATTGACGAAGAGCTTGCTCTTAAATGGCTTCAAACTGGAGCGAAACCATC    200
                     ||..|||||||||||||||||||||||||||||||.|||||.|||||.||
RBAM_015820__    151 ATCAACGAAGAGCTTGCTCTTAAATGGCTTCAAACAGGAGCTAAACCTTC    200

BSNT_02615___    201 TGATACAGTTCGCAACTTGTTCTCTAGCCAAGGAATCATGGAAAAATTCC    250
                     |||||||||.||||||||||||||.|||||||||||.|||||||||||||
RBAM_015820__    201 TGATACAGTCCGCAACTTGTTCTCAAGCCAAGGAATTATGGAAAAATTCC    250

BSNT_02615___    251 ACAACGCTAAACAAGGCAAGTAA    273
                     |||||||||||||||||||||||
RBAM_015820__    251 ACAACGCTAAACAAGGCAAGTAA    273


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