Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02631 and RBAM_015950
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Amino acid alignment /
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:30
# Commandline: needle
# -asequence dna-align/BSNT_02631___topA.1.9828.seq
# -bsequence dna-align/RBAM_015950___topA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02631___topA-RBAM_015950___topA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02631___topA-RBAM_015950___topA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02631___topA
# 2: RBAM_015950___topA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2079
# Identity: 1728/2079 (83.1%)
# Similarity: 1728/2079 (83.1%)
# Gaps: 6/2079 ( 0.3%)
# Score: 7200.0
#
#
#=======================================
BSNT_02631___ 1 ATGTCTGATTATCTAGTCATCGTGGAATCGCCCGCTAAGGCGAAAACGAT 50
||||||||||||||||||||||||||||||||.||.||||||||||||||
RBAM_015950__ 1 ATGTCTGATTATCTAGTCATCGTGGAATCGCCGGCAAAGGCGAAAACGAT 50
BSNT_02631___ 51 TGAACGTTACTTAGGTAAAAAATATAAAGTAAAAGCATCAATGGGACATG 100
|||||||||.|||||.||.|||||||||||.|||||.|||||||||||||
RBAM_015950__ 51 TGAACGTTATTTAGGGAAGAAATATAAAGTCAAAGCTTCAATGGGACATG 100
BSNT_02631___ 101 TCCGGGATCTTCCAAAAAGTCAAATGGGAGTTGACATAGAACAGAATTTT 150
|||||||||||||.|||||||||||||||||||||||.||||||||.|||
RBAM_015950__ 101 TCCGGGATCTTCCGAAAAGTCAAATGGGAGTTGACATCGAACAGAACTTT 150
BSNT_02631___ 151 GAACCGAAATATATTACCATTCGAGGTAAAGGTCCGGTATTAAAAGAGCT 200
|||||||||||||||||.||.||.||.|||||.||.||.||||||||..|
RBAM_015950__ 151 GAACCGAAATATATTACGATCCGCGGAAAAGGCCCTGTTTTAAAAGAATT 200
BSNT_02631___ 201 GAAAACGGCAGCGAAAAAAGCCAAAAAAGTGTATCTCGCAGCCGACCCCG 250
.|||||.||.||.||.|||||.||||||||.||||||||.||||||||||
RBAM_015950__ 201 AAAAACAGCGGCAAAGAAAGCAAAAAAAGTCTATCTCGCGGCCGACCCCG 250
BSNT_02631___ 251 ACAGAGAAGGGGAAGCGATTGCATGGCATTTGGCACACAGTCTTGATTTA 300
|||||||||||||||||||||||||||||.|.|||||||||||||||.|.
RBAM_015950__ 251 ACAGAGAAGGGGAAGCGATTGCATGGCATCTCGCACACAGTCTTGATCTG 300
BSNT_02631___ 301 GATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGC 350
|||||||.|||.||||||||.||.||.|||||.|||||.||.||||||||
RBAM_015950__ 301 GATCTCAGCTCGGACTGCCGGGTCGTCTTTAATGAAATAACGAAAGACGC 350
BSNT_02631___ 351 TATTAAGGAATCGTTTAAGCATCCCCGCATGATCAATATGGATTTAGTGG 400
.|||||.|||||.|||||.|||||.||||||||.|||||||||.|.||.|
RBAM_015950__ 351 CATTAAAGAATCATTTAAACATCCGCGCATGATTAATATGGATCTTGTCG 400
BSNT_02631___ 401 ATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATC 450
||||||||||.|||.|.||.||.||||||||.||.||||||||.||||||
RBAM_015950__ 401 ATGCACAGCAGGCGCGCCGCATATTAGACAGACTCGTCGGATACAAAATC 450
BSNT_02631___ 451 AGTCC-AATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGACGCG 499
||.|| |.|||| |||||||||||.||||||||.||.||.||.||.||.|
RBAM_015950__ 451 AGCCCGATTCTT-TGGAAAAAAGTAAAAAAAGGCCTCAGTGCGGGCCGTG 499
BSNT_02631___ 500 TGCAATCCGTTGCCCTCCGTTTGATTATTGACCGTGAAAAAGAGATTAAC 549
|||||||||||||.|||||..||||.||.|||||.|||||.||.||.|||
RBAM_015950__ 500 TGCAATCCGTTGCGCTCCGGCTGATCATCGACCGGGAAAAGGAAATCAAC 549
BSNT_02631___ 550 GACTTTAAGCCCGAGGAATATTGGACAATTGACGGTACGTTCTTAAAAGG 599
||.|||||.||.||.||.||.|||||.|||..|||..|.||.||||||||
RBAM_015950__ 550 GATTTTAAACCTGAAGAGTACTGGACGATTACCGGCTCATTTTTAAAAGG 599
BSNT_02631___ 600 TCAAGAAACCTTTGAAGCGAGCTTTTTCGGGAAAAACGGCAAAAAACTTC 649
..||||.||.||||||||..|.||||||||.||||||||||||||.||||
RBAM_015950__ 600 AAAAGAGACGTTTGAAGCCGGATTTTTCGGAAAAAACGGCAAAAAGCTTC 649
BSNT_02631___ 650 CTTTAAATAGTGAAGCTGATGTAAAAGAGATTCTTTCTCAGCTCAAAGGG 699
|||||||.||.||||..||.|||||||..||.|||.|||||||.|||||.
RBAM_015950__ 650 CTTTAAAAAGCGAAGAAGACGTAAAAGCCATCCTTGCTCAGCTGAAAGGC 699
BSNT_02631___ 700 AATCAATATACAGTTGAAAAAGTAACCAAAAAGGAACGCAAACGTAATCC 749
|||.|.|||||||||||.||.||.||.|||||.||.||||||||.|||||
RBAM_015950__ 700 AATAAGTATACAGTTGACAAGGTTACGAAAAAAGAGCGCAAACGAAATCC 749
BSNT_02631___ 750 CGCTTTGCCTTTTACCACTTCTACCCTGCAGCAGGAAGCGGCTCGCAAGC 799
||||.||||.|||||.||.||.||.|||||||||||.||.||..|.||||
RBAM_015950__ 750 CGCTCTGCCGTTTACAACGTCCACTCTGCAGCAGGAGGCTGCAAGAAAGC 799
BSNT_02631___ 800 TCAATTTCAGAGCGAAGAAAACGATGATGATTGCACAGCAATTATATGAA 849
|.|||||||||||||||||||||||||||||.||.|||||||||||||||
RBAM_015950__ 800 TGAATTTCAGAGCGAAGAAAACGATGATGATCGCGCAGCAATTATATGAA 849
BSNT_02631___ 850 GGAATTGATTTAGGAAGAGAAGGAACGGTTGGTCTGATCACGTATATGAG 899
|||||||||.|.||.|.||||||.||.||.||.||.||||||||||||||
RBAM_015950__ 850 GGAATTGATCTCGGCAAAGAAGGGACAGTCGGGCTCATCACGTATATGAG 899
BSNT_02631___ 900 AACGGATTCAACCCGTATTTCAAATACGGCTGTTGATGAAGCAGCTGCAT 949
||||||.|||||.||.|||||.|||||.||.|||||.|||||..|.||.|
RBAM_015950__ 900 AACGGACTCAACGCGGATTTCCAATACAGCCGTTGAAGAAGCGTCAGCTT 949
BSNT_02631___ 950 TTATTGATCAGACATATGGAAAAGAGTTCCTAGGCGGAAAACGGAAGCCT 999
|||||||||||.|.||.||||||||||.|.|||..|||||||||||.||.
RBAM_015950__ 950 TTATTGATCAGGCGTACGGAAAAGAGTACTTAGCGGGAAAACGGAAACCG 999
BSNT_02631___ 1000 GCGAAAAAGAATGAAAATGCCCAGGATGCCCACGAAGCAATTCGGCCGAC 1049
||.||.||.||||||||.||.||.||||||||||||||.||.||.|||||
RBAM_015950__ 1000 GCAAAGAAAAATGAAAACGCTCAAGATGCCCACGAAGCGATCCGCCCGAC 1049
BSNT_02631___ 1050 ATCAGTTCTTAGAAAACCAAGTGAATTAAAAGCAGTCCTCGGCAGAGACC 1099
.||.||.||.||||||||....||.||||||||.||.||.||.|||||||
RBAM_015950__ 1050 TTCGGTGCTCAGAAAACCTGCCGACTTAAAAGCGGTGCTTGGAAGAGACC 1099
BSNT_02631___ 1100 AAATGAGACTGTATAAATTAATTTGGGAGCGTTTTGTTGCCAGCCAAATG 1149
|..|.|||.|.||.||..|.|||||||||||.||||||||.|||||.|||
RBAM_015950__ 1100 AGCTCAGATTATACAAGCTGATTTGGGAGCGCTTTGTTGCAAGCCAGATG 1149
BSNT_02631___ 1150 GCATCGGCTGTTCTCGATACAATGAGTGTCGACCTGACAAACAACGGTTT 1199
||..|.||.||.||.|||||.|||||.|||||.||.|..||.|||||.||
RBAM_015950__ 1150 GCGCCTGCCGTCCTTGATACGATGAGCGTCGATCTCAGCAATAACGGATT 1199
BSNT_02631___ 1200 GACATTTCGTGCAAATGGAAGTAAAGTCAAGTTTTCCGGGTTTATGAAGG 1249
||||||.||.|||||.||||||||||||||.||..||||.||.|||||.|
RBAM_015950__ 1200 GACATTCCGGGCAAACGGAAGTAAAGTCAAATTCGCCGGCTTCATGAAAG 1249
BSNT_02631___ 1250 TGTATGTTGAAGGAAAAGACGATCAAATGGAAGAAAAAGACCGGATGCTG 1299
|.|||||.||.||.|||||||||||..||||||||||||||||.|||||.
RBAM_015950__ 1250 TCTATGTAGAGGGTAAAGACGATCAGCTGGAAGAAAAAGACCGCATGCTT 1299
BSNT_02631___ 1300 CCTGA-CTTACAAGAAGGCGACACGGTATTATCAAAAGATATAGAACCTG 1348
||.|| |||| ||||.||.||||||||.|||||.||||||||.||.||||
RBAM_015950__ 1300 CCGGACCTTA-AAGAGGGAGACACGGTTTTATCGAAAGATATTGAGCCTG 1348
BSNT_02631___ 1349 AGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTCGTT 1398
|||||||.|||||.||||||||||||||.|||||.|||||.||.||.|||
RBAM_015950__ 1349 AGCAGCACTTTACTCAGCCGCCTCCGCGTTATACAGAGGCGCGCCTGGTT 1398
BSNT_02631___ 1399 AAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGAC 1448
|||||.||||||||||..||.|||||||||||.||.||||||||.|||||
RBAM_015950__ 1399 AAAACGCTTGAAGAACTGGGGATCGGCCGTCCTTCGACATATGCGCCGAC 1448
BSNT_02631___ 1449 ACTTGATACTATTCAGCGTCGCGGCTACGTGGCATTGGATAATAAACGTT 1498
.|||||.||.||.|||||.|||||.|||||||.|.|.||.||||||||.|
RBAM_015950__ 1449 TCTTGACACCATCCAGCGCCGCGGTTACGTGGGACTAGACAATAAACGGT 1498
BSNT_02631___ 1499 TCGTTCCGACTGAATTAGGTCAGATCGTTCTTGA-CTTGATCATGGAGTT 1547
|.||.||||||||..|.||.||||||||.||.|| ||| |||||||||||
RBAM_015950__ 1499 TTGTGCCGACTGAGCTTGGGCAGATCGTGCTGGATCTT-ATCATGGAGTT 1547
BSNT_02631___ 1548 TTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATGGAGAGAGATC 1597
||||||.||.||||||||||||||.||.||.|||||||||||.|||||||
RBAM_015950__ 1548 TTTCCCGGAAATCATTAACGTTGAATTCACGGCTAAAATGGAAAGAGATC 1597
BSNT_02631___ 1598 TTGATCATGTTGAAGAAGGCAATACTGAATGGGTCAAAATTATTGATAAT 1647
||||.|||||||||||.|||.|.||.||||||||..||||.|||||.|..
RBAM_015950__ 1598 TTGACCATGTTGAAGATGGCCAGACAGAATGGGTTCAAATCATTGACAGC 1647
BSNT_02631___ 1648 TTCTACACCGATTTTGAAAAACGCGTCAAAAAAGCCGAATCGGAAATGAA 1697
|||||.||.|||||.|||||||||||.||||||||.|||.|.||||||||
RBAM_015950__ 1648 TTCTATACTGATTTCGAAAAACGCGTGAAAAAAGCGGAAGCCGAAATGAA 1697
BSNT_02631___ 1698 GGAAGTTGAGATTGAACCAGAGTATGCTGGAGAGGATTGTGAATTGTGCA 1747
.|||||.||.||||||||.||.||.||.|..||.||||||||.||.|||.
RBAM_015950__ 1698 AGAAGTGGAAATTGAACCTGAATACGCCGATGAAGATTGTGAGTTATGCG 1747
BSNT_02631___ 1748 GTTCTCCAATGGTATATAAAATGGGACGGTACGGTAAATTCTTAGCTTGC 1797
|.||.|..|||||.|||||||||||.||.|||||.|||||..|.||.|||
RBAM_015950__ 1748 GCTCCCGGATGGTTTATAAAATGGGCCGATACGGCAAATTTATGGCGTGC 1797
BSNT_02631___ 1798 TCCAACTTCCCTGACTGCCGGAACACGAAACCGATTGTGAAACAAATCGG 1847
|||||||||||||||||||||||.||.|||||||||||.|||||||||||
RBAM_015950__ 1798 TCCAACTTCCCTGACTGCCGGAATACAAAACCGATTGTCAAACAAATCGG 1847
BSNT_02631___ 1848 TGTGAAGTGCCCGAGCTGCGGAGAAGGAAACATTGTTGAGCGAAAATCGA 1897
.||.||.||.||.|..|||...||||||||||||||.||.||||||||.|
RBAM_015950__ 1848 CGTAAAATGTCCTAAGTGCCATGAAGGAAACATTGTCGAACGAAAATCAA 1897
BSNT_02631___ 1898 AAAAGAAACGGGTGTTTTACGGCTGTGACCGTTATCCGGACTGTGAATTC 1947
||||||||||..|.|||||||||||||||||||||||.||.||.||.|||
RBAM_015950__ 1898 AAAAGAAACGCATCTTTTACGGCTGTGACCGTTATCCTGAATGCGACTTC 1947
BSNT_02631___ 1948 GTATCATGGGACAAACCAATTGAACGAAAATGCCCGAAATGCGGAAAAAT 1997
|||||.|||||||||||.|||||||||||||||||||||||.|.|||.||
RBAM_015950__ 1948 GTATCTTGGGACAAACCGATTGAACGAAAATGCCCGAAATGTGAAAATAT 1997
BSNT_02631___ 1998 GCTCGTCGAGAAAAAACTCAAAAAAGGCATACAAGTCCAATGCGTGGAAT 2047
||||||.||||||||.||.||||||||||||||||||||||||||.||||
RBAM_015950__ 1998 GCTCGTAGAGAAAAAGCTTAAAAAAGGCATACAAGTCCAATGCGTCGAAT 2047
BSNT_02631___ 2048 GCGATTATAAGGAAGAACCACAGAAGTAG 2076
|||||||||||||||||||||||||||||
RBAM_015950__ 2048 GCGATTATAAGGAAGAACCACAGAAGTAG 2076
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