Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02636 and RBAM_015990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence dna-align/BSNT_02636___hslU.1.9828.seq
# -bsequence dna-align/RBAM_015990___hslU.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02636___hslU-RBAM_015990___hslU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02636___hslU-RBAM_015990___hslU.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02636___hslU
# 2: RBAM_015990___hslU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1415
# Identity: 1170/1415 (82.7%)
# Similarity: 1170/1415 (82.7%)
# Gaps: 22/1415 ( 1.6%)
# Score: 4871.0
#
#
#=======================================
BSNT_02636___ 1 ATGGAAAAAAAACCGTTAACTCCTAGACAGATTGTAGATCGGTTAGACCA 50
||||||||.|||||||||||.||.|||||.||.|||||||||||.||.||
RBAM_015990__ 1 ATGGAAAACAAACCGTTAACACCGAGACAAATCGTAGATCGGTTGGATCA 50
BSNT_02636___ 51 ATATATTGTCGGTCAGCAAAATGCGAAAAAAGCTGTCGCCGTGGCATTAA 100
|||.|||||.||.|||||..||||||||||||||||||||||||||||||
RBAM_015990__ 51 ATACATTGTAGGACAGCAGGATGCGAAAAAAGCTGTCGCCGTGGCATTAA 100
BSNT_02636___ 101 GAAACCGCTATAGAAGAAGTCTTCTGGATGAAAAGCTGAAGGACGAGGTC 150
|||||||||||.|.|||||||||||.||||||||.||||..||||||.||
RBAM_015990__ 101 GAAACCGCTATCGCAGAAGTCTTCTTGATGAAAAACTGAGAGACGAGATC 150
BSNT_02636___ 151 GTTCCGAAAAACATTTTAATGATGGGTCCTACCGGCGTCGGGAAAACTGA 200
|||||.||||||||..|.||||||||.||.|||||.||.||||||||.||
RBAM_015990__ 151 GTTCCCAAAAACATCCTGATGATGGGCCCGACCGGGGTGGGGAAAACAGA 200
BSNT_02636___ 201 AATTGCCAGACGAATCGCTAAGCTTTCAGGTGCGCCATTTATCAAAATTG 250
.||.||||||||.|||||.||||||.|.||||||||||||||.|||||||
RBAM_015990__ 201 GATCGCCAGACGGATCGCCAAGCTTACCGGTGCGCCATTTATAAAAATTG 250
BSNT_02636___ 251 AAGCTACTAAATTTACCGAAGTCGGCTATGTAGGCAGAGATGTTGAATCA 300
||||.||.||||||||.||||||||||||||||||||||||||.||||||
RBAM_015990__ 251 AAGCGACAAAATTTACAGAAGTCGGCTATGTAGGCAGAGATGTCGAATCA 300
BSNT_02636___ 301 ATGGTCAGAGATCTTGTGGAGACTTCTGTTCGTCTTATCAAAGAAGAGAA 350
|||||||||||.||.||.|||||.||.||.||.||.||.||||||||.||
RBAM_015990__ 301 ATGGTCAGAGACCTCGTTGAGACATCCGTGCGGCTCATTAAAGAAGAAAA 350
BSNT_02636___ 351 AATGAATGAAGTAAAGGAACAGGCAGAAGAAAATGCAAACAAACGCATTG 400
|||.|..|||||.||.||||||||.||||||||||||||||||||.||.|
RBAM_015990__ 351 AATCAGCGAAGTGAAAGAACAGGCTGAAGAAAATGCAAACAAACGTATAG 400
BSNT_02636___ 401 TTCGTCTGTTAGTTCCTGGGAAGAAAAAACAATCTGGCGTTAAAAATCCG 450
|.||.||..|.|||||.||.||||||||||||.|.||.||.|||||||||
RBAM_015990__ 401 TGCGGCTTCTCGTTCCGGGAAAGAAAAAACAAGCGGGTGTGAAAAATCCG 450
BSNT_02636___ 451 TTTGAAATGTTTTTTGGAGGCAGCCAGCCG---AATGGTGAAGATGAGGC 497
|||||||||.||||.|||||.|.||||.|| || |||.|||||.||
RBAM_015990__ 451 TTTGAAATGCTTTTCGGAGGAAACCAGGCGGCAAA---TGATGATGAAGC 497
BSNT_02636___ 498 GGA-GAGCCAGGAAGAAGCAAACATCGAAGAAAAAAGAAAACGAATGGCG 546
.|| .|| |||||||||||||.|.|.|||||.||||||||.||.||||||
RBAM_015990__ 498 CGACCAG-CAGGAAGAAGCAAGCCTTGAAGAGAAAAGAAAGCGCATGGCG 546
BSNT_02636___ 547 CATCAGCTGGCTTTAGGAGAGCTCGAAGACTACTATGTAACAGTAGAAGT 596
||||||||.||.||.|||||||||||||||.|.||.||..|.|||||.||
RBAM_015990__ 547 CATCAGCTCGCATTGGGAGAGCTCGAAGACCATTACGTCTCCGTAGAGGT 596
BSNT_02636___ 597 CGAAGAGCAGCAGCCTTCTATGTTTGACATGCTGCAGGGCTCGGGTATGG 646
.||||||||||||||.||.|||||||||||||||||.|||||.||.||||
RBAM_015990__ 597 GGAAGAGCAGCAGCCGTCGATGTTTGACATGCTGCAAGGCTCCGGGATGG 646
BSNT_02636___ 647 AGCAGATGGGTATGAACATGCAGGATGCGCTGAGCGGATTAA-----TGC 691
||||||||||.|||||.|||||||||||||||||| || |||
RBAM_015990__ 647 AGCAGATGGGCATGAATATGCAGGATGCGCTGAGC-----AATCTGGTGC 691
BSNT_02636___ 692 CAAAGAAAAAGAAACGGCGCAAAATGACAGTCAGAGAAGCCAGAAAAGTC 741
||||.||.||.|||||.|||||||||||.|||||||||||.||.||.||.
RBAM_015990__ 692 CAAAAAAGAAAAAACGCCGCAAAATGACGGTCAGAGAAGCAAGGAAGGTT 741
BSNT_02636___ 742 CTGACGAATGAAGAAGCAAGCAAACTCATCGATATGGATGAAGTCAGCCA 791
|||||.||||||||.|||.|||||.|.||||||||||||||||||.||||
RBAM_015990__ 742 CTGACCAATGAAGAGGCAGGCAAATTAATCGATATGGATGAAGTCGGCCA 791
BSNT_02636___ 792 GGAAGC--TGTTCAGAGAGCAGAAGAGAGCGGGATTATCTTTATCGATGA 839
.||.|| |||| .|||||.||||||.||||.|||||||||||.||.||
RBAM_015990__ 792 AGAGGCCGTGTT--AAGAGCTGAAGAGGGCGGCATTATCTTTATTGACGA 839
BSNT_02636___ 840 GATTGATAAAATCGCAAAGAACGGCGGTGCATCTTCTTCTGCCGATGTTT 889
.||.||||||||||||||.|||||.||.||.|||||.||.||.|||||.|
RBAM_015990__ 840 AATAGATAAAATCGCAAAAAACGGAGGGGCTTCTTCCTCAGCAGATGTAT 889
BSNT_02636___ 890 CAAGAGAAGGCGTTCAGCGGGATATTCTGCCGATTGTTGAGGGCTCAACC 939
|.||||||||||||||..|.|||||.||.||||||||.||.||.||.|||
RBAM_015990__ 890 CGAGAGAAGGCGTTCAAAGAGATATCCTTCCGATTGTCGAAGGATCTACC 939
BSNT_02636___ 940 GTTGTCACAAAATATGGTTCTGTAAAAACAGACCATGTATTATTTATTGC 989
||.|||||.|||||.||.||.||.||||||||.||.||..|.|||||.||
RBAM_015990__ 940 GTCGTCACGAAATACGGCTCCGTCAAAACAGATCACGTGCTGTTTATCGC 989
BSNT_02636___ 990 AGCAGGAGCGTTTCATATGGCCAAACCGTCTGATTTGATTCCTGAGCTGC 1039
|||.||.||.||.|||||||||||||||||||||.|||||||.|||||||
RBAM_015990__ 990 AGCCGGGGCATTCCATATGGCCAAACCGTCTGATCTGATTCCGGAGCTGC 1039
BSNT_02636___ 1040 AGGGGCGTTTCCCGATTCGTGTAGAACTGAACAAACTCACGGTAGACGAC 1089
||||.||.||.|||||||||||||||.|||.|||.||.||||||||.||.
RBAM_015990__ 1040 AGGGCCGCTTTCCGATTCGTGTAGAATTGAGCAAGCTGACGGTAGATGAT 1089
BSNT_02636___ 1090 TTCGTGAGAATTTTGGTTGAGCCGGATAATGCGCTGCTGAAACAATATCA 1139
||.||||..|||.|.||.||.||.|||||.||||||.|.|||||||||||
RBAM_015990__ 1090 TTTGTGAAGATTCTCGTCGAACCCGATAACGCGCTGTTAAAACAATATCA 1139
BSNT_02636___ 1140 GGCATTATTGCAGACAGAAGGTATATCTCTTGAATTTTCTGACGAAGCTA 1189
|||.||||||||||||||||||||||||||||||||||||||||||||||
RBAM_015990__ 1140 GGCTTTATTGCAGACAGAAGGTATATCTCTTGAATTTTCTGACGAAGCTA 1189
BSNT_02636___ 1190 TTCATAAGATTGCTGAAGTTGCTTATCATGTGAACCAGGACACAGATAAT 1239
|||.||||||.||.|||||.||||||||||||||.|||||.||.||.||.
RBAM_015990__ 1190 TTCGTAAGATCGCCGAAGTGGCTTATCATGTGAATCAGGATACGGACAAC 1239
BSNT_02636___ 1240 ATCGGTGCGAGACGCCTTCATACAATACTTGAACGCCTATTAGAAGATTT 1289
|||||.||||||.|.|||||.||.|||.|.|||||.||.||.|||||..|
RBAM_015990__ 1240 ATCGGAGCGAGAAGGCTTCACACGATATTGGAACGTCTCTTGGAAGACCT 1289
BSNT_02636___ 1290 GTCGTTTGAAGCTCCAGATGTAACGATGGAGAAAATAACGATTACACCAC 1339
||||||||||||.||.||.||.||||||||.|||.|..|.||.||.||.|
RBAM_015990__ 1290 GTCGTTTGAAGCGCCGGACGTGACGATGGAAAAAGTCGCTATCACGCCGC 1339
BSNT_02636___ 1340 AGTATGTCGAAGAAAAGCTCGGAACGATAGCCAAAAACAAAGATTTAAGT 1389
|.||.||.||||||||||||||||||||.||.||.|||||||||.|||||
RBAM_015990__ 1340 AATACGTTGAAGAAAAGCTCGGAACGATTGCAAACAACAAAGATCTAAGT 1389
BSNT_02636___ 1390 CAATTTATATTGTGA 1404
|||||||||||||||
RBAM_015990__ 1390 CAATTTATATTGTGA 1404
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