Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02641 and RBAM_016020
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:31
# Commandline: needle
# -asequence dna-align/BSNT_02641___flgC.1.9828.seq
# -bsequence dna-align/RBAM_016020___flgC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02641___flgC-RBAM_016020___flgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02641___flgC-RBAM_016020___flgC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02641___flgC
# 2: RBAM_016020___flgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 460
# Identity: 354/460 (77.0%)
# Similarity: 354/460 (77.0%)
# Gaps: 14/460 ( 3.0%)
# Score: 1319.0
#
#
#=======================================
BSNT_02641___ 1 ATGACAGCTTTTCATAGCTTAAATGTTTCAGCATCGGCTTTAACAGCTCA 50
||||..|..|||||.|||||||||.||||.|..||.||||||||.||.||
RBAM_016020__ 1 ATGAGTGGCTTTCAAAGCTTAAATATTTCGGGCTCCGCTTTAACTGCACA 50
BSNT_02641___ 51 GCGAGTCAGAATGGACGTTGTATCATCTAACTTAGCAAATATGGATACGA 100
|||.|||.|.||||||||.|||||.||.|||.|.||.|||||||||||.|
RBAM_016020__ 51 GCGTGTCCGGATGGACGTCGTATCGTCCAACCTGGCCAATATGGATACAA 100
BSNT_02641___ 101 CAAGAGCTAAGCAGGTGAATGGAGAGTGGGTGCCTTACAGAAGAAAAATG 150
|.|||||.||||||||.|||||.||.||||||||||||||||||||..||
RBAM_016020__ 101 CGAGAGCGAAGCAGGTAAATGGCGAATGGGTGCCTTACAGAAGAAAGCTG 150
BSNT_02641___ 151 GTCTCCCTTCAGTCAAAAGGTGAATCGTTCTCTTCCATTCTCAATTCTCA 200
||.||.||.||.||...|||.|||||.||.||.|||.||.|..|||| ||
RBAM_016020__ 151 GTATCTCTCCAATCCGGAGGCGAATCATTTTCGTCCCTTTTACATTC-CA 199
BSNT_02641___ 201 A-ATGAGCGGAAGCGGGAA-TGCTGGAAACGGTGTGAAGGTTTCAAAAAT 248
| ||||.||||| |.|||| .||.|||||.||.||.|||||.||.....|
RBAM_016020__ 200 AGATGAACGGAA-CAGGAAGCGCGGGAAATGGCGTAAAGGTATCTGGTGT 248
BSNT_02641___ 249 TACGGAGGATGATTCGGATTTTAATCTTGTCTATGATCCGACAG-ACCCT 297
||||||.||....||.|.|||||||||.||.||||||||| .|| |.|||
RBAM_016020__ 249 TACGGAAGACCCGTCCGCTTTTAATCTCGTTTATGATCCG-GAGAATCCT 297
BSNT_02641___ 298 GATGC----AAACGCTGATGGATATGTACAAAAGCCTAATGTTGATCCAT 343
||||| ||| ||.||||||||||||||.||.|||||.|||||||
RBAM_016020__ 298 GATGCGAATAAA----GACGGATATGTACAAAAACCAAATGTAGATCCAT 343
BSNT_02641___ 344 TAAAGGAAATGGTTGATCTTGTCAGCAGCACCAGATCATATGAGGCGAAT 393
||||.||||||||.|||||||||||||||||.|||||||||||.||.||.
RBAM_016020__ 344 TAAAAGAAATGGTGGATCTTGTCAGCAGCACGAGATCATATGAAGCAAAC 393
BSNT_02641___ 394 GTCACGGCGATGAATGCCACAAAGGGAATGCTGATGAAGGCGTTAGAAAT 443
||.||.||..|.||.||..|.||.||.|||||..||||||||||||||||
RBAM_016020__ 394 GTAACTGCATTAAACGCTTCCAAAGGCATGCTTTTGAAGGCGTTAGAAAT 443
BSNT_02641___ 444 CGGAAAGTAG 453
|||||||||.
RBAM_016020__ 444 CGGAAAGTAA 453
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