Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02642 and RBAM_016030

See Amino acid alignment / Visit BSNT_02642 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:31
# Commandline: needle
#    -asequence dna-align/BSNT_02642___fliE.1.9828.seq
#    -bsequence dna-align/RBAM_016030___fliE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02642___fliE-RBAM_016030___fliE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02642___fliE-RBAM_016030___fliE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02642___fliE
# 2: RBAM_016030___fliE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     270/321 (84.1%)
# Similarity:   270/321 (84.1%)
# Gaps:           0/321 ( 0.0%)
# Score: 1146.0
# 
#
#=======================================

BSNT_02642___      1 GTGATTAATGCAATTTCTCCTTTTCAGGTTCAAAATACTCAAAACACTCA     50
                     |||.||||.||.|||.|||||||||||.|||||.|.||.|||||||||||
RBAM_016030__      1 GTGGTTAACGCTATTACTCCTTTTCAGCTTCAACAAACCCAAAACACTCA     50

BSNT_02642___     51 AAATGCAACAAATCAAGTAAACAATAGCCAAAAAACAGATTCTTCAAATC    100
                     |||.|.|||.||||||.|||||.|.|..||||||||.|||||||||||.|
RBAM_016030__     51 AAACGTAACGAATCAATTAAACCAAACTCAAAAAACTGATTCTTCAAACC    100

BSNT_02642___    101 AAACAAGCTTTTCGGAGCTTTTAAAAAACTCTATTAGTTCGTTAAATGAG    150
                     |||||||||||||||||||||||||||||||||||..|||||||||||||
RBAM_016030__    101 AAACAAGCTTTTCGGAGCTTTTAAAAAACTCTATTGATTCGTTAAATGAG    150

BSNT_02642___    151 TCCCAAGTAGCTTCTGACAACATGACTAATGCCTTGGCTGCAGGAAAAGA    200
                     ||.||||||...||||||.|.||.||.||.|...|||||||||||||.||
RBAM_016030__    151 TCACAAGTAAAATCTGACCAAATAACGAACGAACTGGCTGCAGGAAAGGA    200

BSNT_02642___    201 TGTAAATCTTGATGAGGTCATGATCGCTGCTCAAAAAGCTAGCATCTCTC    250
                     ||||||.|||||.|||||||||||||||||.||||||||.|..||.||||
RBAM_016030__    201 TGTAAACCTTGACGAGGTCATGATCGCTGCCCAAAAAGCAAATATTTCTC    250

BSNT_02642___    251 TAACTGCAGCAACAGAGTTCCGCAATAAAGCTGTGGAAGCTTATCAGGAG    300
                     |.||.||.||.||.||.||||||||||||||.||||||||.||||||||.
RBAM_016030__    251 TGACGGCCGCTACCGAATTCCGCAATAAAGCCGTGGAAGCCTATCAGGAA    300

BSNT_02642___    301 ATTATGAGAATGCAAATGTAG    321
                     ||.|||||||||||.||||||
RBAM_016030__    301 ATCATGAGAATGCAGATGTAG    321


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