Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02645 and RBAM_016050
See
Amino acid alignment /
Visit
BSNT_02645 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence dna-align/BSNT_02645___fliG.1.9828.seq
# -bsequence dna-align/RBAM_016050___fliG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02645___fliG-RBAM_016050___fliG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02645___fliG-RBAM_016050___fliG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02645___fliG
# 2: RBAM_016050___fliG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1017
# Identity: 832/1017 (81.8%)
# Similarity: 832/1017 (81.8%)
# Gaps: 0/1017 ( 0.0%)
# Score: 3420.0
#
#
#=======================================
BSNT_02645___ 1 ATGGCGAGACGTGATCAAGATAAGCTTACAGGAAAACAAAAAGCAGCCAT 50
|||||||.|||||||||..|.|||||||||||||||||||||||||||||
RBAM_016050__ 1 ATGGCGAAACGTGATCAGAACAAGCTTACAGGAAAACAAAAAGCAGCCAT 50
BSNT_02645___ 51 TCTCATGATTTCCTTGGGGTTAGATGTGTCAGCTTCTGTCTATAAGCACT 100
.||||||||||||||.||..|.|||||.|||||||||||.||.|||||.|
RBAM_016050__ 51 CCTCATGATTTCCTTAGGCCTTGATGTATCAGCTTCTGTGTACAAGCATT 100
BSNT_02645___ 101 TAACCGATGAAGAAATTGAAAGGCTTACTCTGGAAATATCAGGTGTTCGA 150
|..|.||.||||||||||||||..|.||.||.||.||.||.||.||..||
RBAM_016050__ 101 TGTCTGAAGAAGAAATTGAAAGATTGACACTCGAGATTTCGGGAGTCAGA 150
BSNT_02645___ 151 AGCGTCGATCATCAAAAAAAGGATGAAATCATAGAAGAATTTCATAATAT 200
||||||||||||||||.|||.|||||||||||.|||||||||||||||||
RBAM_016050__ 151 AGCGTCGATCATCAAAGAAAAGATGAAATCATTGAAGAATTTCATAATAT 200
BSNT_02645___ 201 AGCCATTGCGCAAGATTATATTTCTCAAGGCGGTTTAAGCTATGCAAGAC 250
.||.||.||.||.||.||||||||.|||||||||||||..||.||..|.|
RBAM_016050__ 201 CGCAATCGCTCAGGACTATATTTCACAAGGCGGTTTAAATTACGCCCGCC 250
BSNT_02645___ 251 AAGTTCTGGAAAAGGCGCTTGGAGAGGATAAGGCGGAGAACATTCTAAAC 300
||||.||.|||||.|||||.|||||.||.||.||||..|.||||.|||||
RBAM_016050__ 251 AAGTGCTTGAAAAAGCGCTCGGAGAAGACAAAGCGGTAAGCATTTTAAAC 300
BSNT_02645___ 301 AGGCTGACTTCTTCTTTGCAGGTTAAACCATTTGATTTTGCCAGAAAAGC 350
|||||.||.||||||||||||||.||.||.||||||||.||.||||||||
RBAM_016050__ 301 AGGCTCACCTCTTCTTTGCAGGTAAAGCCGTTTGATTTCGCGAGAAAAGC 350
BSNT_02645___ 351 GGAGCCAGAACAAATTTTGAATTTTATCCAGCAAGAGCATCCGCAGACGA 400
||||||.|||||.|||||.|||||.||.|||||.||.||||||||.||||
RBAM_016050__ 351 GGAGCCCGAACAGATTTTAAATTTCATTCAGCAGGAACATCCGCAAACGA 400
BSNT_02645___ 401 TGGCGTTAATCTTGTCTTATTTAGATCCAGTGCAGGCCGGGCAAATTTTA 450
|||||.|.||.||.||.||..|.||.||.|||||||||||.||.|||||.
RBAM_016050__ 401 TGGCGCTGATTTTATCCTACCTTGACCCGGTGCAGGCCGGACAGATTTTG 450
BSNT_02645___ 451 TCCGAGCTGAACCCTGAAGTGCAGGCTGAGGTTGCGAGAAGAATCGCGGT 500
||.|||||||||||.||.||.|||||||||||.||.|||||.||.|||||
RBAM_016050__ 451 TCTGAGCTGAACCCGGACGTTCAGGCTGAGGTGGCAAGAAGGATTGCGGT 500
BSNT_02645___ 501 CATGGATAGAACGTCTCCAGAAATAATTAACGAGGTAGAACGGATTCTGG 550
.|||||.|||||||||||.|||||.||.||.||.||.||.|||.|.||.|
RBAM_016050__ 501 TATGGACAGAACGTCTCCTGAAATCATAAATGAAGTGGAGCGGGTCCTTG 550
BSNT_02645___ 551 AACAAAAATTATCTTCTGCATTTACTCAGGATTATACACAAACAGGCGGA 600
|||||||..|.||.||..|.|||||.|||||||||||.||.||.|||||.
RBAM_016050__ 551 AACAAAAGCTGTCCTCCTCCTTTACGCAGGATTATACGCAGACCGGCGGC 600
BSNT_02645___ 601 ATTGAAGCTGTTGTGGAAGTGTTAAACGGGGTAGACAGAGGGACAGAGAA 650
||.|||||.|||||.||||||||||||||.|||||||||||.||.||.||
RBAM_016050__ 601 ATAGAAGCCGTTGTTGAAGTGTTAAACGGCGTAGACAGAGGAACGGAAAA 650
BSNT_02645___ 651 GACGATCTTGGATTCATTGGAAATTCAGGATCCCGATCTTGCTGAAGAGA 700
.||||||.|.||||||||.|||||.||.|||||.||..|.||.||.||.|
RBAM_016050__ 651 AACGATCCTTGATTCATTAGAAATCCAAGATCCTGAATTGGCGGATGAAA 700
BSNT_02645___ 701 TTAAAAAGCGGATGTTTGTCTTCGAAGATATTGTCACACTTGATAACCGT 750
|.|||||.||||||||||||||.||||||||||||||.||||||||||||
RBAM_016050__ 701 TCAAAAAACGGATGTTTGTCTTTGAAGATATTGTCACCCTTGATAACCGT 750
BSNT_02645___ 751 GCAATTCAGAGAGTCATTCGCGATGTTGAGAACGACGATTTGCTCCTTTC 800
||.||||||.|.||.||..|.||.|||||.||||||||..|.||.|||||
RBAM_016050__ 751 GCGATTCAGCGCGTGATCAGAGACGTTGAAAACGACGACCTCCTGCTTTC 800
BSNT_02645___ 801 ATTAAAGGTTGCAAGCGAGGAAGTCAAAGAAATTGTGTTCAACAATATGT 850
|||.||||||||.||||||||||||||||||||.||.||||.||||||||
RBAM_016050__ 801 ATTGAAGGTTGCGAGCGAGGAAGTCAAAGAAATCGTCTTCAGCAATATGT 850
BSNT_02645___ 851 CACAGCGTATGGTTGAAACCTTCAAAGAAGAAATGGAATTTATGGGCCCT 900
|||||||||||||||||||.||.|||||.|||||||||.|||||||.|||
RBAM_016050__ 851 CACAGCGTATGGTTGAAACGTTTAAAGAGGAAATGGAAATTATGGGGCCT 900
BSNT_02645___ 901 GTACGCTTGAAAGATGTAGAAGAAGCACAATCGAGAATTGTAAGCATCGT 950
||.||.|||...|||||.|||||.||.|||||.|||||.||..||.||||
RBAM_016050__ 901 GTGCGTTTGCGTGATGTGGAAGAGGCGCAATCAAGAATCGTGGGCGTCGT 950
BSNT_02645___ 951 CAGAAAGCTTGAAGAAGCCGGTGAAATTGTGATAGCAAGAGGCGGAGGGG 1000
|.|.|||||.|||||||||||.||||||||.||.||..||||||||||.|
RBAM_016050__ 951 CCGCAAGCTGGAAGAAGCCGGAGAAATTGTAATCGCGCGAGGCGGAGGAG 1000
BSNT_02645___ 1001 ATGATATTATTGTCTAA 1017
|.|||||||||||||||
RBAM_016050__ 1001 ACGATATTATTGTCTAA 1017
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.