Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02647 and RBAM_016070

See Amino acid alignment / Visit BSNT_02647 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:32
# Commandline: needle
#    -asequence dna-align/BSNT_02647___fliI.1.9828.seq
#    -bsequence dna-align/RBAM_016070___fliI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02647___fliI-RBAM_016070___fliI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02647___fliI-RBAM_016070___fliI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02647___fliI
# 2: RBAM_016070___fliI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1321
# Identity:    1052/1321 (79.6%)
# Similarity:  1052/1321 (79.6%)
# Gaps:           8/1321 ( 0.6%)
# Score: 4174.0
# 
#
#=======================================

BSNT_02647___      1 ATGAAGACACAGAGTCTGATAGATTGTATAGAAATGACAGACTCGTATAA     50
                     ||||||||||||..|.|.|||||.|..||.||||...|.||..||||.||
RBAM_016070__      1 ATGAAGACACAGTATTTAATAGACTCAATTGAAACAGCGGATCCGTACAA     50

BSNT_02647___     51 ACGGTACGGAAAAGTCAAGCGGGTAATCGGCCTGATGATTGAATCAAAAG    100
                     .||.|||||.||.||.||.|||||.|||||.|||||||||||||||||||
RBAM_016070__     51 GCGCTACGGCAAGGTTAAACGGGTCATCGGGCTGATGATTGAATCAAAAG    100

BSNT_02647___    101 GGCCAGCAAGCTCAATTGGCGACGTGTGCCTGATTTATGCAAAAGGACAA    150
                     ||||.|.|||||||||.||.||.||.||.||.||||||.|.|||||.|| 
RBAM_016070__    101 GGCCCGAAAGCTCAATCGGAGATGTTTGTCTCATTTATCCGAAAGGCCA-    149

BSNT_02647___    151 TCTGGG---AAAGTCATTAAAGCTGAGGTAGTCGGCTTCCAGGAAGAAAA    197
                       ||.|   ||||..||||||||||||||.||.||||||||.||.||.||
RBAM_016070__    150 --TGCGAAAAAAGCGATTAAAGCTGAGGTTGTAGGCTTCCAAGATGAGAA    197

BSNT_02647___    198 TATTTTGCTTATGCCTTATTTAGAGGCTGCGAGCATTGCACCTGGCAGCA    247
                     .|||.||.|.|||||||||.|.||.||.||.||||||||.||.|||||||
RBAM_016070__    198 CATTCTGTTAATGCCTTATCTGGAAGCGGCCAGCATTGCGCCGGGCAGCA    247

BSNT_02647___    248 TTGTAGAAGCTACTGGGGAATCACTTCGGGTTAAAGTTGGGACCGGACTG    297
                     ||||.||.||.||||||||.||.||.||..|.|||||.||..|.||..|.
RBAM_016070__    248 TTGTGGAGGCCACTGGGGAGTCGCTCCGCATCAAAGTAGGCGCGGGTTTA    297

BSNT_02647___    298 ATCGGACAAGTCATCGATGCTTTTGGAGAACCGCTTGACGGAAAGCTTCT    347
                     |||||||||||..||||.||.||.||.|||||.||||||||...|...||
RBAM_016070__    298 ATCGGACAAGTTGTCGACGCGTTCGGCGAACCTCTTGACGGCCGGGCGCT    347

BSNT_02647___    348 GCCGAAAGGGCTTTCGCCTGTATCAACGGAGCAATCACCGCCCAACCCGA    397
                     .||||||||..|.||.||.||.||.|||||.||..|.|||||.|||||||
RBAM_016070__    348 TCCGAAAGGTTTGTCCCCCGTTTCGACGGAACAGCCGCCGCCAAACCCGA    397

BSNT_02647___    398 TGAAACGGCCGCCTATCCGTGAAAAGATGGGTGTTGGAGTCAGATCAATT    447
                     |||||||.|||||.||.||.||||||||||||||.||.||||||||.|||
RBAM_016070__    398 TGAAACGCCCGCCGATACGGGAAAAGATGGGTGTCGGTGTCAGATCGATT    447

BSNT_02647___    448 GACAGCTTGCTGACAGTCGGTAAAGGCCAGCGGATTGGAATTTTTGCAGG    497
                     |||||..|||||||.||.||.|||||.|||.|.||.||.||||||||.||
RBAM_016070__    448 GACAGTCTGCTGACGGTAGGAAAAGGGCAGAGAATCGGGATTTTTGCCGG    497

BSNT_02647___    498 AAGCGGTGTTGGAAAAAGCACCTTAATGGGGATGATCGCCAAGCAGACAG    547
                     ||||||.||.||||||||||||.|.|||||.||||||||.||||||||.|
RBAM_016070__    498 AAGCGGAGTCGGAAAAAGCACCCTGATGGGAATGATCGCGAAGCAGACTG    547

BSNT_02647___    548 AGGCTGACTTAAACGTCATTGCACTTGTCGGAGAACGCGGACGAGAGGTT    597
                     |.|||||.||||||.|.||.|||||.|||||.|||||.||.||.|||||.
RBAM_016070__    548 AAGCTGATTTAAACATTATCGCACTCGTCGGGGAACGGGGGCGCGAGGTG    597

BSNT_02647___    598 CGGGAGTTTATTGAAAAAGATCTGGGGAAAGAGGGGCTGAAACGATCGAT    647
                     ||.||.||.||.||.||.|||.|.||..||||.||.||||||||.|||||
RBAM_016070__    598 CGTGAATTCATCGAGAAGGATTTAGGCGAAGAAGGCCTGAAACGCTCGAT    647

BSNT_02647___    648 TGTAGTCGTTGCCACCTCAGACCAGCCAGCATTAATGAGATTGAAAGCGG    697
                     .||.||.||.||.|||||.||.|||||.||.||||||.|.||||||||||
RBAM_016070__    648 AGTCGTAGTCGCGACCTCTGATCAGCCTGCCTTAATGCGTTTGAAAGCGG    697

BSNT_02647___    698 CATATACAGCGACTGCCATTGCCGAGTATTTCCGAGATAAAGGCCAAAAT    747
                     |.|||||.||.||.||||||||.|||||.|||||.||||||||||..|||
RBAM_016070__    698 CGTATACGGCCACCGCCATTGCAGAGTACTTCCGGGATAAAGGCCGGAAT    747

BSNT_02647___    748 GTCATGTTTATGATGGATTCTGTTACAAGGGTGGCAATGGCGCAGCGAGA    797
                     ||.|||||.||||||||.|||||.||.|||||.||.|||||.|||||.||
RBAM_016070__    748 GTGATGTTCATGATGGACTCTGTCACGAGGGTCGCGATGGCTCAGCGGGA    797

BSNT_02647___    798 GATTGGACTGGCTGCAGGAGAGCCTCCGACGACAAAAGGTTATACACCTT    847
                     .||.||.|||||.||.|||||.||.|||||.||||||||.||||||||||
RBAM_016070__    798 AATCGGCCTGGCAGCGGGAGAACCGCCGACAACAAAAGGATATACACCTT    847

BSNT_02647___    848 CAGTGTTCGCTATTTTACCTCGTTTACTAGAACGAACAGGTGCAAACGAG    897
                     |.||||||||||||||.||.|||||.||.|||.||||.||.||.||.||.
RBAM_016070__    848 CTGTGTTCGCTATTTTGCCCCGTTTGCTGGAAAGAACGGGCGCGAATGAA    897

BSNT_02647___    898 CATGGAACCATTACGGCATTTTATACAGTGTTGGTAGACGGGGATGACAT    947
                     ||.|||||.||.||.||.||||||||.||..|.||.|||||.||||||||
RBAM_016070__    898 CAAGGAACGATAACCGCTTTTTATACGGTTCTCGTTGACGGAGATGACAT    947

BSNT_02647___    948 GAATGAGCCGATTGCCGATACTGTACGCGGAATTTTAGACGGACATATTG    997
                     |||.||.||||||||||||||.||.||||||||.||||||||.|||||.|
RBAM_016070__    948 GAACGAACCGATTGCCGATACGGTGCGCGGAATATTAGACGGGCATATCG    997

BSNT_02647___    998 TGTTGGACAGGGCGCTTGCCAATAAAGGCCAGTTTCCTGCAGTTAACGTA   1047
                     |..|.||..|||||||||||||.|||||.|||||.||.||.||.|||.|.
RBAM_016070__    998 TTCTCGATCGGGCGCTTGCCAACAAAGGGCAGTTCCCGGCCGTGAACATC   1047

BSNT_02647___   1048 CTAAAAAGCATCAGCAGGGTGATGTCAAACATTTCA-ACAAAACAGCATC   1096
                     ||.|||||||||||||||||.|||||.||.|||||| |||.|.| ||||.
RBAM_016070__   1048 CTGAAAAGCATCAGCAGGGTCATGTCTAATATTTCAGACACATC-GCATA   1096

BSNT_02647___   1097 TGGATGCGGCAAATAAATTCCGTGAACTTTTATCGACATATCAAAATTCG   1146
                     |.||.|||||.||.||||||||.||.|||.|.||.||.||||||||.||.
RBAM_016070__   1097 TAGAGGCGGCCAACAAATTCCGCGATCTTCTGTCAACTTATCAAAACTCT   1146

BSNT_02647___   1147 GAAGATCTCATTAATATCGGAGCTTACAAAAGAGGATCATCCAGAGAAAT   1196
                     |||||||||||||||||||||||||||||||||||.|||||.||||||||
RBAM_016070__   1147 GAAGATCTCATTAATATCGGAGCTTACAAAAGAGGGTCATCAAGAGAAAT   1196

BSNT_02647___   1197 TGATGAAGCGATACAATTTTATCCGCAGCTTATTCAATTTTTAAAGCAGG   1246
                     ||||||||||||.||.|||||||||||||||||||||||||||||.||.|
RBAM_016070__   1197 TGATGAAGCGATTCAGTTTTATCCGCAGCTTATTCAATTTTTAAAACAAG   1246

BSNT_02647___   1247 GAACAGACGAACCGGCTTTATTGGAAGAAAGCATTGCTGTATTAACTAGT   1296
                     ||||.||.|||||.|||..|||||||||.||||||||.|.|||.||.|||
RBAM_016070__   1247 GAACGGAAGAACCTGCTCAATTGGAAGACAGCATTGCGGCATTGACGAGT   1296

BSNT_02647___   1297 TTGACAGGAAATGAGGAATAA   1317
                     .||||||||||.|||||||||
RBAM_016070__   1297 CTGACAGGAAAAGAGGAATAA   1317


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