Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02649 and RBAM_016080
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:32
# Commandline: needle
# -asequence dna-align/BSNT_02649___fliJ.1.9828.seq
# -bsequence dna-align/RBAM_016080___fliJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02649___fliJ-RBAM_016080___fliJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02649___fliJ-RBAM_016080___fliJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02649___fliJ
# 2: RBAM_016080___fliJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 445
# Identity: 365/445 (82.0%)
# Similarity: 365/445 (82.0%)
# Gaps: 2/445 ( 0.4%)
# Score: 1493.0
#
#
#=======================================
BSNT_02649___ 1 GTGGCTTATCAATTTAGATTCCAAAAGCTGCTGGAACTAAAAGAAAATGA 50
|||||.||.|||||.|||||.|||||||||||||||.|||||||||||||
RBAM_016080__ 1 GTGGCATACCAATTCAGATTTCAAAAGCTGCTGGAATTAAAAGAAAATGA 50
BSNT_02649___ 51 AAAAGACCAATCCTTATCCGAGTATCAG-CAATCAGTTTCTGAATTTGAA 99
||||||||||.|.||..|.||.|| ||| |||||.|||||.||||||||.
RBAM_016080__ 51 AAAAGACCAAACATTGACTGAATA-CAGACAATCGGTTTCAGAATTTGAG 99
BSNT_02649___ 100 AACGTTGCTGAAAAATTATATGAGAATATGAGCAAAAAGGAATTGCTGGA 149
|..||.|||||||||.|||||||.||||||||||||||.||||||||.||
RBAM_016080__ 100 ACAGTGGCTGAAAAACTATATGAAAATATGAGCAAAAAAGAATTGCTCGA 149
BSNT_02649___ 150 ACAAAATAAGGAAAAGAAATTAAAAAGCGGCATGAGTGTACAAGAAATGA 199
|.||.|.||.|||...||..|.|||.||||.|||||.||.||.|||||||
RBAM_016080__ 150 AAAAGACAAAGAATCAAAGCTGAAATGCGGGATGAGCGTTCAGGAAATGA 199
BSNT_02649___ 200 GGCACTACCAACAATTTGTCTCAAATCTTGATAATACGATCTATCACTAT 249
|.||.||.||.|||||.||.||.||||||||.||.||.||||||||.|||
RBAM_016080__ 200 GACATTATCAGCAATTCGTTTCCAATCTTGAGAACACCATCTATCATTAT 249
BSNT_02649___ 250 CAAAAGCTTGTCATTATGAAAAGAAATCAAATGAATCAAAAACAAGAAAT 299
||||||||||||||.||||||.|||||.||||||||.|.||.||.|||..
RBAM_016080__ 250 CAAAAGCTTGTCATCATGAAACGAAATGAAATGAATGAGAAGCAGGAACA 299
BSNT_02649___ 300 TTTGACAGAGAAAAACATTGAAGTGAAAAAGTTTGAAAAAATGCGTGAAA 349
..|.||.||.||||||||||||||.||.||.||||||||||||||.||||
RBAM_016080__ 300 GCTCACCGAAAAAAACATTGAAGTAAAGAAATTTGAAAAAATGCGGGAAA 349
BSNT_02649___ 350 AACAGTTTAAAATGTTTGCTCTTGAAGATAAAGCTGCAGAAATGAAAGAA 399
||||.|||||.|||||.||.||||||||.|||||||||||.||||..|||
RBAM_016080__ 350 AACAATTTAATATGTTCGCACTTGAAGACAAAGCTGCAGAGATGAGGGAA 399
BSNT_02649___ 400 ATGGACGATATTTCGATTAAGCAGTTTATGATTCAAGGCCATTAG 444
||||||||.|||||.||.|||||||||||||||||.||.||||||
RBAM_016080__ 400 ATGGACGACATTTCAATCAAGCAGTTTATGATTCAGGGGCATTAG 444
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