Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02659 and RBAM_016140
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:33
# Commandline: needle
# -asequence dna-align/BSNT_02659___fliL.1.9828.seq
# -bsequence dna-align/RBAM_016140___fliL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02659___fliL-RBAM_016140___fliL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02659___fliL-RBAM_016140___fliL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02659___fliL
# 2: RBAM_016140___fliL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 433
# Identity: 313/433 (72.3%)
# Similarity: 313/433 (72.3%)
# Gaps: 23/433 ( 5.3%)
# Score: 1127.5
#
#
#=======================================
BSNT_02659___ 1 ATGAAGAAAAAGTTAATGATCATATTACTAATTATTCTTATCGTAATTGG 50
|||||||||||.|||.|.|||||.||.||.||||||.|.||.||.||.|.
RBAM_016140__ 1 ATGAAGAAAAAATTAGTCATCATTTTGCTGATTATTTTAATTGTCATCGC 50
BSNT_02659___ 51 TGCTCTCGGGGCGGCGGCTTATTTTGTTTTAGGCGGAAAGTCCGAAAAAA 100
.|..|||||..||||.||.||||||||..|..|||||.|.||||..|||
RBAM_016140__ 51 CGGCCTCGGAACGGCAGCATATTTTGTCGTCAGCGGACATTCCGGCAAA- 99
BSNT_02659___ 101 GTGAAGCGAAAAAAAG-----TATTGATGAAATCGTTGCGTCTTCTGTTG 145
||.|||||| .|||||.|||.|||||||..|..||||..
RBAM_016140__ 100 -------GATAAAAAGCCGACAATTGACGAAGTCGTTGCAGCCACTGTGT 142
BSNT_02659___ 146 ATGTAGAAGAGATCACAACAAATTTAAAGTCTGATAACATTATCCGTCTT 195
.|||.||.||.||.||.|||||.|||||||||||.|.|||.||||||.|.
RBAM_016140__ 143 CTGTCGACGATATTACGACAAACTTAAAGTCTGACAGCATCATCCGTATC 192
BSNT_02659___ 196 GCTATTAAGCTTGAAACTGATTCTGATAAATCAAAAGAAGAACTTGAGAA 245
|..||.|||||||||||.||.||.|.||||.|.||.|||||||||||.||
RBAM_016140__ 193 GGCATCAAGCTTGAAACCGACTCGGCTAAAGCGAAGGAAGAACTTGAAAA 242
BSNT_02659___ 246 ACGTGATTTCCAAGTGAAAGACGCTGTTATATCACTGC-----TTGCTGA 290
|||.|||||.||.||||||||| .|.||||.|.| |.||.||
RBAM_016140__ 243 ACGCGATTTTCAGGTGAAAGAC-----AACATCATTTCCATTTTAGCCGA 287
BSNT_02659___ 291 TACGAATGCTGATCAGATTGAGGGAGACAAGGGAAAAGAAACCTTTAAGA 340
.||.|..||.|...|||||||||||||.||.||||.||||.|.|||||..
RBAM_016140__ 288 CACAAGCGCCGGAGAGATTGAGGGAGATAAAGGAAGAGAAGCGTTTAAAC 337
BSNT_02659___ 341 AGGAACTGAAAGATAAAATAAATAGCTACCTCCAAGAAGGAAAAGTAGAA 390
|...|.|.|||||.|||.||||.|||||.|||||||||||||||||..|.
RBAM_016140__ 338 AATCATTAAAAGAGAAAGTAAACAGCTATCTCCAAGAAGGAAAAGTTCAG 387
BSNT_02659___ 391 AAAGTGTATATTACCTCCTTTAATCTGCAATAA 423
||||||||.||||||||||||||||||||||||
RBAM_016140__ 388 AAAGTGTACATTACCTCCTTTAATCTGCAATAA 420
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