Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02685 and RBAM_016330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence dna-align/BSNT_02685___rpsB.1.9828.seq
# -bsequence dna-align/RBAM_016330___rpsB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02685___rpsB-RBAM_016330___rpsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02685___rpsB-RBAM_016330___rpsB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02685___rpsB
# 2: RBAM_016330___rpsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 742
# Identity: 698/742 (94.1%)
# Similarity: 698/742 (94.1%)
# Gaps: 2/742 ( 0.3%)
# Score: 3302.0
#
#
#=======================================
BSNT_02685___ 1 ATGTCAGTCATTTCTATGAAGCAATTGCTTGAAGCTGGTGTTCACTTCGG 50
||||||||.|||||||||||.|||||||||||||||||||||||||||||
RBAM_016330__ 1 ATGTCAGTTATTTCTATGAAACAATTGCTTGAAGCTGGTGTTCACTTCGG 50
BSNT_02685___ 51 TCACCAAACACGCCGTTGGAACCCAAAAATGAAGCGTTACATTTTCACGG 100
.||||||||||||||.||||||||||||||||||||||||||||||||||
RBAM_016330__ 51 CCACCAAACACGCCGCTGGAACCCAAAAATGAAGCGTTACATTTTCACGG 100
BSNT_02685___ 101 AGCGTAACGGAATCTACATCATTGACCTTCAAAAAACAGTCAAAAAAGTA 150
||||||||||||||||||||||||||||||||||||||||.|||||||||
RBAM_016330__ 101 AGCGTAACGGAATCTACATCATTGACCTTCAAAAAACAGTGAAAAAAGTA 150
BSNT_02685___ 151 GAGGAAGCTTACAACTTCACTAAAAATCTTGCTGCTGAAGGCGGAAAAAT 200
||||||||||||||||||||.|||||.|||||||||||||||||||||||
RBAM_016330__ 151 GAGGAAGCTTACAACTTCACGAAAAACCTTGCTGCTGAAGGCGGAAAAAT 200
BSNT_02685___ 201 CCTTTTCGTCGGAACAAAAAAACAAGCTCAAGATTCTGTTAAAGAAGAAG 250
.|||||||||||.|||||||||||||||||.|||||||||||||||||||
RBAM_016330__ 201 TCTTTTCGTCGGCACAAAAAAACAAGCTCAGGATTCTGTTAAAGAAGAAG 250
BSNT_02685___ 251 CTCAACGCTCTGGCATGTACTATGTCAACCAACGCTGGTTGGGCGGTACA 300
||..||||||||||||||||||||||||||||||||||||||||||||||
RBAM_016330__ 251 CTGTACGCTCTGGCATGTACTATGTCAACCAACGCTGGTTGGGCGGTACA 300
BSNT_02685___ 301 TTAACAAACTTCGAAACAATCCAAAAACGTATTAAACGTCTTAAAGACAT 350
.|.||||||||||||||||||||||||||.|||||.|||||.||||||||
RBAM_016330__ 301 CTGACAAACTTCGAAACAATCCAAAAACGCATTAAGCGTCTGAAAGACAT 350
BSNT_02685___ 351 TGAAAAAATGCAAGAAAACGGTACGTTTGATGTACTTCCTAAAAAAGAAG 400
.||.||||||||||||||||||||.|||||.||||||||.||||||||||
RBAM_016330__ 351 CGAGAAAATGCAAGAAAACGGTACATTTGAAGTACTTCCGAAAAAAGAAG 400
BSNT_02685___ 401 TTGTTCAATTGAAAAAAGAATTAGAGCGTCTTGAAAAATTCCTAGGCGGA 450
|||||||||||||||||||||||||||||||||||||||||||.||||||
RBAM_016330__ 401 TTGTTCAATTGAAAAAAGAATTAGAGCGTCTTGAAAAATTCCTCGGCGGA 450
BSNT_02685___ 451 ATTAAAGATATGAAGGATCTTCCTGATGCATTATTCATCATCGATCCTCG 500
||||||||.|||||||||||||||||||||||||||||||||||||||||
RBAM_016330__ 451 ATTAAAGACATGAAGGATCTTCCTGATGCATTATTCATCATCGATCCTCG 500
BSNT_02685___ 501 CAAAGAGCGCATCGCTGTTGCGGAAGCTCGCAAATTAAACATCCCTATCA 550
||||||||||||||||||||||||||||||||||||.|||||.|||||||
RBAM_016330__ 501 CAAAGAGCGCATCGCTGTTGCGGAAGCTCGCAAATTGAACATTCCTATCA 550
BSNT_02685___ 551 TCGGTATCGTAGATACTAACTGTGATCCAGATGAAATCGATGTTGTTATC 600
||||.|||||||||||.|||||||||||.||||||||.|||||.||.|||
RBAM_016330__ 551 TCGGAATCGTAGATACAAACTGTGATCCTGATGAAATTGATGTCGTAATC 600
BSNT_02685___ 601 CCAGCGAACGATGACGCTATCCGCGCTGTTAAACTTCTAACTTCTAAAAT 650
||.||.|||||||||||.|||||||||||.||||||||.|||||||||||
RBAM_016330__ 601 CCTGCAAACGATGACGCAATCCGCGCTGTCAAACTTCTTACTTCTAAAAT 650
BSNT_02685___ 651 GGCAGATGC-AATCTTAGAAGCGAAGCAAGGCGAAGAAGAAGCGGAAGTT 699
||||||||| |.|||| |||||||||||||||||||||||||||||||.|
RBAM_016330__ 651 GGCAGATGCTATTCTT-GAAGCGAAGCAAGGCGAAGAAGAAGCGGAAGCT 699
BSNT_02685___ 700 GCTGAAGAAACTGCACCAGAAACAGAAACAACAACTGCGTAA 741
||||||||.||||||||.|||||||||||.||||||||||||
RBAM_016330__ 700 GCTGAAGAGACTGCACCTGAAACAGAAACGACAACTGCGTAA 741
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