Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02687 and RBAM_016340
See
Amino acid alignment /
Visit
BSNT_02687 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence dna-align/BSNT_02687___tsf.1.9828.seq
# -bsequence dna-align/RBAM_016340___tsf.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02687___tsf-RBAM_016340___tsf.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02687___tsf-RBAM_016340___tsf.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02687___tsf
# 2: RBAM_016340___tsf
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 882
# Identity: 785/882 (89.0%)
# Similarity: 785/882 (89.0%)
# Gaps: 0/882 ( 0.0%)
# Score: 3537.0
#
#
#=======================================
BSNT_02687___ 1 ATGGCAATTACTGCACAGCAAGTAAAAGAACTGCGTGAAAAAACTGGCGC 50
|||||.||||||||||||||.|||||||||||||||.|||||||.|||||
RBAM_016340__ 1 ATGGCTATTACTGCACAGCAGGTAAAAGAACTGCGTCAAAAAACAGGCGC 50
BSNT_02687___ 51 GGGCATGATGGATTGTAAAAAAGCGTTAACTGAAACTGACGGAGATATGG 100
.||.||||||||.|||||||||||.||.||||||||||||||||||||||
RBAM_016340__ 51 TGGTATGATGGACTGTAAAAAAGCATTGACTGAAACTGACGGAGATATGG 100
BSNT_02687___ 101 ACAAAGCAATTGACCTTTTAAGAGAAAAAGGGATTGCAAAAGCAGCGAAA 150
||||||||||.||||||.|.|||||||||||.|||||.|||||.||.|||
RBAM_016340__ 101 ACAAAGCAATCGACCTTCTGAGAGAAAAAGGAATTGCGAAAGCGGCTAAA 150
BSNT_02687___ 151 AAAGCTGACCGTATCGCAGCAGAAGGTTCTACTCTTATTAAAACTGACGG 200
|||||||||||||||||.||.|||||||||||||||||||||||||||||
RBAM_016340__ 151 AAAGCTGACCGTATCGCTGCTGAAGGTTCTACTCTTATTAAAACTGACGG 200
BSNT_02687___ 201 CAACAAAGGCGTTATCCTAGAAGTAAACTCTGAAACTGATTTCGTTGCGA 250
||||||||||||||||.|||||||||||||||||||||||||||||||||
RBAM_016340__ 201 CAACAAAGGCGTTATCTTAGAAGTAAACTCTGAAACTGATTTCGTTGCGA 250
BSNT_02687___ 251 AAAACGAAGGTTTTAAAGAGCTTCTTAACACTTTAGCTGACCACCTTCTT 300
||||||||||.||.|||||||||||.|||||..|.|||||||||||||||
RBAM_016340__ 251 AAAACGAAGGCTTCAAAGAGCTTCTGAACACGCTTGCTGACCACCTTCTT 300
BSNT_02687___ 301 GCAAACACGCCAGCTGATGTTGAAGAAGCAATGGGCCAAAAAATGGAAAA 350
||||||.|.||.||||||.||||||||||||||||.||||||||||||||
RBAM_016340__ 301 GCAAACGCTCCTGCTGATCTTGAAGAAGCAATGGGTCAAAAAATGGAAAA 350
BSNT_02687___ 351 TGGCTCAACTGTTGAAGAGTACATCACAAGCGCAGTTGCTAAAATCGGTG 400
.||.||.|||||||||||.||||||||||||...||||||||||||||.|
RBAM_016340__ 351 CGGTTCTACTGTTGAAGAATACATCACAAGCAACGTTGCTAAAATCGGAG 400
BSNT_02687___ 401 AGAAAATCACTCTTCGCCGCTTTACAGTTCTTACAAAAGACGACAGCTCT 450
|||||||||||||||||||.|||.|.|||.||.|||||||.||||||...
RBAM_016340__ 401 AGAAAATCACTCTTCGCCGTTTTGCTGTTATTTCAAAAGAAGACAGCGAA 450
BSNT_02687___ 451 GCATTCGGTGCTTACCTTCACATGGGCGGCCGCATCGGTGTATTAACTGT 500
||.|||||||||||||||||||||||.|||||||||||.||||||.|.||
RBAM_016340__ 451 GCGTTCGGTGCTTACCTTCACATGGGAGGCCGCATCGGCGTATTATCCGT 500
BSNT_02687___ 501 TCTCAACGGTACAACTGATGAAGAAACTGCGAAAGATATCGCAATGCACG 550
|||.|.|||.||||||||.|||||...|||.|||||.|||||.|||||.|
RBAM_016340__ 501 TCTTAGCGGAACAACTGACGAAGATCTTGCAAAAGACATCGCGATGCATG 550
BSNT_02687___ 551 TTGCTGCGGTTAACCCTCGTTACATTTCTCGTGATCAAGTATCTGAAGAA 600
||||.|||||.||.||||||||||||||.||.||.|||||.|||||||||
RBAM_016340__ 551 TTGCAGCGGTAAATCCTCGTTACATTTCCCGCGACCAAGTGTCTGAAGAA 600
BSNT_02687___ 601 GAAACAAATCATGAGCGTCAAATCTTAACTCAGCAAGCCCTCCAAGAAGG 650
|||.||||.|||||||||||.||..|.|||||||||||.||.||||||||
RBAM_016340__ 601 GAAGCAAACCATGAGCGTCAGATTCTGACTCAGCAAGCTCTTCAAGAAGG 650
BSNT_02687___ 651 CAAACCTGAAAACATCGTAGCGAAAATGGTTGAAGGCCGTCTGAACAAAT 700
||||||.||||||||||||||.||||||||||||||||||||||||||||
RBAM_016340__ 651 CAAACCGGAAAACATCGTAGCTAAAATGGTTGAAGGCCGTCTGAACAAAT 700
BSNT_02687___ 701 TCTTCGAAGAAATTTGTCTATTAGACCAAGCGTTCGTTAAAAACCCAGAT 750
||||||||||||||||..|||||||||||||.|||||||||||||||||.
RBAM_016340__ 701 TCTTCGAAGAAATTTGCTTATTAGACCAAGCTTTCGTTAAAAACCCAGAC 750
BSNT_02687___ 751 GAAAAAGTGAAACAAGTTATTGCAGCGAAAAACGCTACTGTTCAAACTTT 800
||||||||||||||||||.|.||.|||||||||||..|||||.||||||.
RBAM_016340__ 751 GAAAAAGTGAAACAAGTTGTGGCTGCGAAAAACGCATCTGTTAAAACTTA 800
BSNT_02687___ 801 TGTCCGCTATGAAGTTGGAGAAGGCATCGAAAAACGTCAAGAAAACTTTG 850
.||||||||.||||||||||||||.||.||||||||.|||||||||||||
RBAM_016340__ 801 CGTCCGCTACGAAGTTGGAGAAGGTATTGAAAAACGCCAAGAAAACTTTG 850
BSNT_02687___ 851 CTGAAGAAGTAATGAACCAAGTGAAAAAATAA 882
||||||||||.|||||||||||||||||||||
RBAM_016340__ 851 CTGAAGAAGTTATGAACCAAGTGAAAAAATAA 882
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.