Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02688 and RBAM_016350

See Amino acid alignment / Visit BSNT_02688 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:35
# Commandline: needle
#    -asequence dna-align/BSNT_02688___pyrH.1.9828.seq
#    -bsequence dna-align/RBAM_016350___pyrH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02688___pyrH-RBAM_016350___pyrH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02688___pyrH-RBAM_016350___pyrH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02688___pyrH
# 2: RBAM_016350___pyrH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 723
# Identity:     619/723 (85.6%)
# Similarity:   619/723 (85.6%)
# Gaps:           0/723 ( 0.0%)
# Score: 2679.0
# 
#
#=======================================

BSNT_02688___      1 ATGGAAAAACCAAAATACAAACGTATCGTATTAAAGCTTAGCGGGGAAGC     50
                     ||||||||||||||||||||.||||||||.||||||||||||||.|||||
RBAM_016350__      1 ATGGAAAAACCAAAATACAATCGTATCGTTTTAAAGCTTAGCGGAGAAGC     50

BSNT_02688___     51 ATTGGCAGGAGAACAGGGAAATGGAATTAACCCGACTGTCATTCAATCCA    100
                     ||||||||||||.||||||||.||.|||||.|||||||||||.|||||||
RBAM_016350__     51 ATTGGCAGGAGAGCAGGGAAACGGCATTAATCCGACTGTCATCCAATCCA    100

BSNT_02688___    101 TTGCAAAGCAAGTGAAGGAAATCGCTGAGCTTGAAGTCGAAGTGGCTGTT    150
                     |.||.||.|||||.||.|||||||||||||||||.|||||||||||.||.
RBAM_016350__    101 TCGCTAAACAAGTAAAAGAAATCGCTGAGCTTGACGTCGAAGTGGCCGTA    150

BSNT_02688___    151 GTAGTAGGCGGCGGCAACTTATGGCGCGGAAAAACAGGAAGTGACCTGGG    200
                     ||.||||||||||||||||||||||||||||||||.||.||||||.|.||
RBAM_016350__    151 GTCGTAGGCGGCGGCAACTTATGGCGCGGAAAAACGGGCAGTGACTTAGG    200

BSNT_02688___    201 CATGGACCGCGCGACTGCTGACTATATGGGAATGCTGGCGACAGTAATGA    250
                     .||||||||.||||||||.||.||||||||.|||||.||.||.||.||||
RBAM_016350__    201 AATGGACCGTGCGACTGCCGATTATATGGGCATGCTTGCTACTGTCATGA    250

BSNT_02688___    251 ATTCGCTTGCTCTTCAAGACAGCTTGGAAACACTCGGAATCCAGTCCAGA    300
                     |.||.|||||.||.||.||||||.|||||||.||||||||.|||||||||
RBAM_016350__    251 ACTCACTTGCCCTGCAGGACAGCCTGGAAACGCTCGGAATTCAGTCCAGA    300

BSNT_02688___    301 GTGCAAACATCCATTGAAATGAGACAAGTTGCTGAACCGTACATAAGAAG    350
                     |||||.|||||.|||||||||.|.||.||.|||||.||.|||||.|||||
RBAM_016350__    301 GTGCAGACATCAATTGAAATGCGTCAGGTCGCTGAGCCTTACATCAGAAG    350

BSNT_02688___    351 AAAAGCGATACGCCACTTAGAGAAAAAACGTGTCGTTATTTTCGCTGCGG    400
                     ||||||.||.||||||.|.|||||||||||.||.||||||||.||.||||
RBAM_016350__    351 AAAAGCCATCCGCCACCTGGAGAAAAAACGCGTTGTTATTTTTGCCGCGG    400

BSNT_02688___    401 GCACAGGAAACCCATATTTCTCAACTGATACGACAGCTGCACTGCGGGCT    450
                     |.|||||||||||.||||||||.||.||.||.||.||.||.|||||.||.
RBAM_016350__    401 GAACAGGAAACCCTTATTTCTCTACGGACACAACCGCAGCGCTGCGTGCC    450

BSNT_02688___    451 GCTGAAATTGAGGCAGACGTTATTTTGATGGCTAAAAATAACGTTGACGG    500
                     ||||||||.||.||.|||||.||.||.|||||.||||||||.||.|||||
RBAM_016350__    451 GCTGAAATCGAAGCGGACGTGATCTTAATGGCGAAAAATAATGTCGACGG    500

BSNT_02688___    501 TGTGTATAATGCTGATCCTAGAAAAGATGAATCAGCTGTTAAGTATGAAT    550
                     ||||||||||||||||||.|||||||||||.|||||.|||||.||.|||.
RBAM_016350__    501 TGTGTATAATGCTGATCCGAGAAAAGATGAGTCAGCCGTTAAATACGAAA    550

BSNT_02688___    551 CACTTTCTTATCTTGACGTTCTTAAAGACGGCCTGGAAGTCATGGATTCA    600
                     .|.|.||||||||.||.||..|.||||||||.|||||||||||||||||.
RBAM_016350__    551 AATTATCTTATCTCGATGTGTTAAAAGACGGGCTGGAAGTCATGGATTCT    600

BSNT_02688___    601 ACAGCTTCCTCTTTATGCATGGACAATGACATTCCGCTTATCGTCTTTTC    650
                     ||.|||||.||..||||.|||||.|||||.||||||||.|||||||||||
RBAM_016350__    601 ACGGCTTCTTCACTATGTATGGATAATGATATTCCGCTGATCGTCTTTTC    650

BSNT_02688___    651 TATTATGGAAGAAGGAAATATCAAACGTGCCGTTATCGGTGAATCAATCG    700
                     |||||||||||||||||||||.||.||||||||.|||||.||||||||||
RBAM_016350__    651 TATTATGGAAGAAGGAAATATTAAGCGTGCCGTAATCGGCGAATCAATCG    700

BSNT_02688___    701 GAACGATCGTGAGGGGGAAATAA    723
                     ||||||||||.||||||||||||
RBAM_016350__    701 GAACGATCGTAAGGGGGAAATAA    723


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