Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02693 and RBAM_016390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:35
# Commandline: needle
# -asequence dna-align/BSNT_02693___dxr.1.9828.seq
# -bsequence dna-align/RBAM_016390___dxr.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02693___dxr-RBAM_016390___dxr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02693___dxr-RBAM_016390___dxr.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02693___dxr
# 2: RBAM_016390___dxr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1161
# Identity: 916/1161 (78.9%)
# Similarity: 916/1161 (78.9%)
# Gaps: 18/1161 ( 1.6%)
# Score: 3577.5
#
#
#=======================================
BSNT_02693___ 1 TTGAAAAATATTTGTCTTTTAGGAGCAACAGGATCAATCGGCGAACAGAC 50
|||||.||||||||||||||||||||||||||||||||.||.||.|||||
RBAM_016390__ 1 TTGAAGAATATTTGTCTTTTAGGAGCAACAGGATCAATAGGGGAGCAGAC 50
BSNT_02693___ 51 TCTTGATGTACTGCGTGCA--CATCAAGATCAATTTCAGCTGGTATCTAT 98
..|.||.|||.||| ||| |||||||||||.||.|..||.||.||.||
RBAM_016390__ 51 GTTAGACGTATTGC--GCATGCATCAAGATCAGTTCCGTCTCGTCTCGAT 98
BSNT_02693___ 99 GTCGTTTGGCAGAAATATTGATAAGGCCGTTCCAATGATTGAGGTC-TTT 147
|.|.||.||.|.|||....||.||.||..|.||..||| |.||..| |||
RBAM_016390__ 99 GACTTTCGGTAAAAACGCCGAGAAAGCGATCCCGTTGA-TCAGAACGTTT 147
BSNT_02693___ 148 CAGCCGAAGTTTGTCTCTGTCGGTGATCTGGATACATATCATAAATTAAA 197
||||||||.|.|.|..|.|||||.||..|||||||||||||.|||.|.||
RBAM_016390__ 148 CAGCCGAAATATATAGCAGTCGGCGACATGGATACATATCAAAAAGTGAA 197
BSNT_02693___ 198 ACAAATGTCTTTTTCTTTTGAATGCCAAATCGGGTTGGGAGAAGAAGGAC 247
|.||..|||||||||...||||||.||||||||..|.|||||||||||.|
RBAM_016390__ 198 AGAAGCGTCTTTTTCGCATGAATGTCAAATCGGCATCGGAGAAGAAGGCC 247
BSNT_02693___ 248 TGATAGAAGCAGCAGTGATGGAGGAGGTTGACATTGTTGTCAACGCTTTG 297
||||.|||||||||||.|||||.||.||.||.||.||.|||||.||..||
RBAM_016390__ 248 TGATTGAAGCAGCAGTCATGGACGAAGTGGATATCGTGGTCAATGCGCTG 297
BSNT_02693___ 298 CTTGGAAGCGTCGGTCTTATCCCGACGTTAAAGGCGATTGAACAGAAAAA 347
|||||||||||||||.|.||||||||.||.||.|||||||||||||||||
RBAM_016390__ 298 CTTGGAAGCGTCGGTTTAATCCCGACTTTGAAAGCGATTGAACAGAAAAA 347
BSNT_02693___ 348 AACAATTGCGCTTGCAAATAAGGAAACTCTTGTCACTGCAGGGCATATAG 397
||||||||||||||||||||||||||||||.||||||||.||||||||||
RBAM_016390__ 348 AACAATTGCGCTTGCAAATAAGGAAACTCTCGTCACTGCCGGGCATATAG 397
BSNT_02693___ 398 TAAAAGAACATGCTAAGAAATATGATGTTCCGCTGCTGCCTGTTGACAGT 447
|.||||.|||.||.||...|||.|.||||||.||.||.||.||.|||||.
RBAM_016390__ 398 TGAAAGGACACGCAAAACGATACGGTGTTCCTCTTCTTCCGGTCGACAGC 447
BSNT_02693___ 448 GAGCATTCAGCCATTTTTCAAGCTCTTCAAGGCGAACAGGTTAAAAACAT 497
||.|||||.||.|||||.||.||.||.||||||||||||...|||||.||
RBAM_016390__ 448 GAACATTCCGCTATTTTCCAGGCGCTGCAAGGCGAACAGTGCAAAAATAT 497
BSNT_02693___ 498 TGAACGCCTCATCATTACGGCATCCGGCGGAAGTTTTCGGGACAAGACGC 547
.||.|||||..|||||||||||||||||||.|||||..|.||.||.||||
RBAM_016390__ 498 CGAGCGCCTGGTCATTACGGCATCCGGCGGCAGTTTCAGAGATAAAACGC 547
BSNT_02693___ 548 GGGAGGAGCTCGAATCAGTAACTGTTGAAGATGCATTAAAACATCCAAAC 597
||.|||||||.||.||.|||||..|||..||.||..|.||.||.||.|||
RBAM_016390__ 548 GGCAGGAGCTTGAGTCTGTAACGATTGCCGACGCCCTTAACCACCCGAAC 597
BSNT_02693___ 598 TGGTCAATGGGTGCAAAAATTACAATTGATTCGGCTACAATGATGAATAA 647
|||||.|||||.|||||||||||.|||||.||||||||||||||||||||
RBAM_016390__ 598 TGGTCGATGGGCGCAAAAATTACGATTGACTCGGCTACAATGATGAATAA 647
BSNT_02693___ 648 GGGATTAGAGGTGATCGAGGCACACTGGCTTTTCGATGTACCTTATGAAC 697
.|||.|.||.||.||.|||||.||.|||||.||.||..|.||.|||||||
RBAM_016390__ 648 AGGACTTGAAGTCATTGAGGCGCATTGGCTGTTTGACATTCCGTATGAAC 697
BSNT_02693___ 698 AAATTGATGTGGTTTTACATAAGGAGAGCATCATCCATTCAATGGTTGAG 747
|.|||||.||.||.||||||||||||||||||||.|||||.||||||||.
RBAM_016390__ 698 AGATTGACGTTGTATTACATAAGGAGAGCATCATTCATTCGATGGTTGAA 747
BSNT_02693___ 748 TTCCATGATAAAAGTGTGATCGCACAGCTCGGAACTCCGGATATGAGAGT 797
||.||.||.|.|||.||.|||||.||||||||||.||||||.|||||.||
RBAM_016390__ 748 TTTCACGACAGAAGCGTCATCGCCCAGCTCGGAAATCCGGACATGAGGGT 797
BSNT_02693___ 798 CCCCATTCAATATGCGCTCACTTATCCTGACCGATTGCCATTACCAGATG 847
.||.||||||||||||||.||.|||||.|||||..||||..|.||.||..
RBAM_016390__ 798 GCCGATTCAATATGCGCTGACATATCCGGACCGGCTGCCTCTGCCTGAAA 847
BSNT_02693___ 848 CGAAAAGGCTTGAATTATGGGAAATCGGCAGCCTTCATTTTGAGAAAGCT 897
|.||||||||||||||||||||.|||||.|||||.|||||||.|||||||
RBAM_016390__ 848 CAAAAAGGCTTGAATTATGGGAGATCGGAAGCCTCCATTTTGCGAAAGCT 897
BSNT_02693___ 898 GATTTTGACAGGTTCCGATGCTTACAATTTGCTTTTGAATCAGGTAAAAT 947
||.|||||.||||||||.||||||||||||||.|||||||||||||||||
RBAM_016390__ 898 GACTTTGAAAGGTTCCGCTGCTTACAATTTGCCTTTGAATCAGGTAAAAT 947
BSNT_02693___ 948 AGGAGGAACAATGCCGACAGTGCTAAATGCGGCAAATGAAGTAGCTGTCG 997
|||.|||||.||||||||.||..||||||||||.||.||||.|||.||.|
RBAM_016390__ 948 AGGGGGAACGATGCCGACGGTTTTAAATGCGGCCAACGAAGAAGCCGTTG 997
BSNT_02693___ 998 CTGCCTTTTTAGCTGGCAAGATACCGTTTTTGGCTATTGAAGA-CTGTAT 1046
|.||.|||.|.||.||...|||..|.||.||..|.|||||.|| ||| ||
RBAM_016390__ 998 CCGCTTTTCTTGCCGGACGGATTTCATTCTTATCGATTGAGGACCTG-AT 1046
BSNT_02693___ 1047 CGAAAAGGCACTAACCCGCCATC-----AATTACTGAAAAAACCGAGCCT 1091
.|||.|.|||.|...|||||| | |||| .|..|.|||||.||
RBAM_016390__ 1047 TGAACAAGCATTGGACCGCCA-CAGCGTAATT----CAGGATCCGAGTCT 1091
BSNT_02693___ 1092 GGCGGACATTCAAGAAGTGGACAAAGATACCCGGGGATACGTCAATTCAA 1141
.|||||.||.|||||||||||||||||.||||||||||||||.|||||||
RBAM_016390__ 1092 TGCGGATATCCAAGAAGTGGACAAAGACACCCGGGGATACGTTAATTCAA 1141
BSNT_02693___ 1142 TACTCACATAA 1152
|||||||||||
RBAM_016390__ 1142 TACTCACATAA 1152
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