Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02698 and RBAM_016430

See Amino acid alignment / Visit BSNT_02698 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:37
# Commandline: needle
#    -asequence dna-align/BSNT_02698___ylxS.1.9828.seq
#    -bsequence dna-align/RBAM_016430___ylxS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02698___ylxS-RBAM_016430___ylxS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02698___ylxS-RBAM_016430___ylxS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02698___ylxS
# 2: RBAM_016430___ylxS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 471
# Identity:     411/471 (87.3%)
# Similarity:   411/471 (87.3%)
# Gaps:           0/471 ( 0.0%)
# Score: 1815.0
# 
#
#=======================================

BSNT_02698___      1 ATGAGCAAAAAAGTGACTGACACCGTTCAAGAAATGGCTCAGCCAATCGT     50
                     ||||||||||||||||||||.|||||||||||||||||||||||.||..|
RBAM_016430__      1 ATGAGCAAAAAAGTGACTGATACCGTTCAAGAAATGGCTCAGCCCATACT     50

BSNT_02698___     51 AGACAGCCTTCAGCTGGAACTCGTTGACATTGAATTTGTCAAAGAGGGCC    100
                     .||...|||||||||.||||||||.|||||||||||||||||||||||.|
RBAM_016430__     51 GGATGACCTTCAGCTTGAACTCGTAGACATTGAATTTGTCAAAGAGGGTC    100

BSNT_02698___    101 AAAGCTGGTTCCTTCGCGTGTTTATTGATTCCGATGACGGTGTGGATATT    150
                     |||.||||||||||||||||||||||||||||||..|||||||.||||||
RBAM_016430__    101 AAAACTGGTTCCTTCGCGTGTTTATTGATTCCGAGAACGGTGTTGATATT    150

BSNT_02698___    151 GAGGAATGTGCCAAAGTAAGCGAAGCTTTAAGCGAAAAGCTTGATGAGGC    200
                     |||||.||.||||||||.||||||||.||||||||||||||.||||||||
RBAM_016430__    151 GAGGAGTGCGCCAAAGTCAGCGAAGCGTTAAGCGAAAAGCTGGATGAGGC    200

BSNT_02698___    201 AGACCCAATCAGCCAAAATTACTTTCTTGAAGTCTCATCTCCAGGAGCTG    250
                     .||.||.||||.|||.||.||||||||||||||.||.|||||.|||||.|
RBAM_016430__    201 CGATCCGATCACCCAGAACTACTTTCTTGAAGTATCTTCTCCTGGAGCCG    250

BSNT_02698___    251 AGCGTCCGCTAAAGAAAAAAGCCGATTTCGAAAAATCACTAGGAAAAAAC    300
                     |||||||..||||||||||||||||.||||||||||||||.||.|||||.
RBAM_016430__    251 AGCGTCCATTAAAGAAAAAAGCCGACTTCGAAAAATCACTGGGCAAAAAT    300

BSNT_02698___    301 GTATACATTAAGACGTATGAGCCTATTGACGGCGTAAAAGTGTTTGAAGG    350
                     ||.|||||.||.|||||.||.||.||||||||..||||||||||||||||
RBAM_016430__    301 GTGTACATGAAAACGTACGAACCGATTGACGGTTTAAAAGTGTTTGAAGG    350

BSNT_02698___    351 TGAACTGGCTGAATTTGATGGACAAACAGTGACAGTTGAGATCACGATCA    400
                     ..||.||||||||||.|||||||||||.||.|||.|.|||||.|||.|||
RBAM_016430__    351 CAAATTGGCTGAATTCGATGGACAAACTGTTACAATAGAGATGACGGTCA    400

BSNT_02698___    401 AAACAAGAAAGAAACGGATCAATATTCCGTATGAAAAGATAGCTAATGCA    450
                     |||||||||||||||||.|||||||||||||.|||||.||||||||.|||
RBAM_016430__    401 AAACAAGAAAGAAACGGGTCAATATTCCGTACGAAAAAATAGCTAACGCA    450

BSNT_02698___    451 AGATTAGCTGTTACATTCTAA    471
                     |||||||||||.|||||.|||
RBAM_016430__    451 AGATTAGCTGTAACATTTTAA    471


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