Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02705 and RBAM_016480

See Amino acid alignment / Visit BSNT_02705 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:38
# Commandline: needle
#    -asequence dna-align/BSNT_02705___ylxP.1.9828.seq
#    -bsequence dna-align/RBAM_016480___ylxP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02705___ylxP-RBAM_016480___ylxP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02705___ylxP-RBAM_016480___ylxP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02705___ylxP
# 2: RBAM_016480___ylxP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     232/279 (83.2%)
# Similarity:   232/279 (83.2%)
# Gaps:           0/279 ( 0.0%)
# Score: 972.0
# 
#
#=======================================

BSNT_02705___      1 GTGATCGGATTTGCGGAGTGTGAATGCATCATTTATGATGCAGGATCGCT     50
                     |||||||||||||||||.|||||||||||||||||||||||.|||||..|
RBAM_016480__      1 GTGATCGGATTTGCGGAATGTGAATGCATCATTTATGATGCGGGATCATT     50

BSNT_02705___     51 AAAAGAAAAGCGTGCCGTTCTGAAGCGGGTTTTAACCAGGGTTCAAAACA    100
                     |||.||.||.||.|||||||||||||||.||.||||.||||||||.||.|
RBAM_016480__     51 AAAGGAGAAACGAGCCGTTCTGAAGCGGATTATAACGAGGGTTCAGAATA    100

BSNT_02705___    101 AGTTCAATGTTTCGATTTCGGAGATTGGCTATCAGGACACCTGGCAAAGA    150
                     |||||||.||.|||....|.||.||.||||||||||||||.|||||..|.
RBAM_016480__    101 AGTTCAACGTGTCGGCCGCAGAAATCGGCTATCAGGACACTTGGCAGCGG    150

BSNT_02705___    151 ACCAGCTTCGGAATCGCCGCTGTTTCTTCCTCTCGCGTTCAAACAGAAAA    200
                     |||||||||||||||||||..||.||.|||||||.||||||..|.|||||
RBAM_016480__    151 ACCAGCTTCGGAATCGCCGTCGTCTCCTCCTCTCACGTTCAGGCGGAAAA    200

BSNT_02705___    201 AGAACTGCAACGCGTCCTAGCGTTTATCGATTCTTTTCCTGAAATTGAAC    250
                     .||..|.||.|||||.||.||||||||.||.||.|||||.|||||.||||
RBAM_016480__    201 GGAGATCCAGCGCGTACTCGCGTTTATTGACTCCTTTCCCGAAATAGAAC    250

BSNT_02705___    251 GGACGATCACTAGGACAGAGTGGTTTTAA    279
                     |||||||||||||.|||||||||||||||
RBAM_016480__    251 GGACGATCACTAGAACAGAGTGGTTTTAA    279


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