Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02710 and RBAM_016540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:39
# Commandline: needle
# -asequence dna-align/BSNT_02710___ylxY.1.9828.seq
# -bsequence dna-align/RBAM_016540___ylxY.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02710___ylxY-RBAM_016540___ylxY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02710___ylxY-RBAM_016540___ylxY.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02710___ylxY
# 2: RBAM_016540___ylxY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 973
# Identity: 750/973 (77.1%)
# Similarity: 750/973 (77.1%)
# Gaps: 26/973 ( 2.7%)
# Score: 2892.0
#
#
#=======================================
BSNT_02710___ 1 ATGTACAAAAAATTTGTACCGTTTGCCGTTTTTTTATTTCTTTTTTTTGT 50
||||..||||||||.||.||||||||||||||||||||||||||||||||
RBAM_016540__ 1 ATGTTGAAAAAATTCGTGCCGTTTGCCGTTTTTTTATTTCTTTTTTTTGT 50
BSNT_02710___ 51 CTCATTTGAGATGATGGAAAATCCGCATGCACTTGATTATATAGGGGCAA 100
.||.|||||.|||.|..||||||||.||.||.|||||||.||||..||||
RBAM_016540__ 51 TTCGTTTGAAATGTTAAAAAATCCGTATACAGTTGATTACATAGACGCAA 100
BSNT_02710___ 101 TGAAAAAAGATACGGTGACTGTCACGGCGTCAAAAGACCAATTATATGAA 150
||||||||||..|.||.|||||..|.||.||||||||.|...|.||||||
RBAM_016540__ 101 TGAAAAAAGACGCTGTAACTGTGTCAGCATCAAAAGATCCGCTCTATGAA 150
BSNT_02710___ 151 GAATTGCTTCAAAAAGCGCCGGAGTACGAAGTTAAGCCCCAGAATGCAAG 200
|||||.||.|||||||||.|.|||||.|||||.||||| |||||
RBAM_016540__ 151 GAATTACTGCAAAAAGCGTCAGAGTATGAAGTGAAGCC-------GCAAG 193
BSNT_02710___ 201 A-------ATTGATAAAGTGTGGAAAAGCATTCCAGGCTACAATGGATTA 243
| |||||||||.|.|||||.||.||.||.||.||.||.||.|||
RBAM_016540__ 194 ACGCGCGGATTGATAAAATATGGAAGAGTATACCGGGATATAACGGTTTA 243
BSNT_02710___ 244 AAGGTCAATATTGAACAATCATATAAAAAAATGAAAAAGCATGGTGAGTT 293
||.||||||.|.|||.||||.||||||.|||||||||||.|.||.||.||
RBAM_016540__ 244 AAAGTCAATGTGGAAAAATCCTATAAACAAATGAAAAAGGACGGAGAATT 293
BSNT_02710___ 294 TCGGGAAAAAGATTTGGTGTA-CAGTCAAGTAAAACCAAGTGTTCATCTT 342
||..|||.|.|...|.||.|| .|| ||.||||||||.|..||.||||||
RBAM_016540__ 294 TCACGAAGACGGCCTTGTCTATGAG-CAGGTAAAACCGAAAGTCCATCTT 342
BSNT_02710___ 343 GAGTCACTTCAGCCTGAGCCTATTTATAAAGGAAATCCTGACAAACCGAT 392
||.||.||...|||.||.||.|||||||||||||||||.|||||||||||
RBAM_016540__ 343 GATTCTCTCGCGCCCGAACCCATTTATAAAGGAAATCCCGACAAACCGAT 392
BSNT_02710___ 393 GGTGGCTTTTTTAATCAATGTGGCATGGGGAAATGAGTATTTGGAAAAAA 442
|||.|||||..|.||.|||||.||.|||||||||||.||..||||..|||
RBAM_016540__ 393 GGTCGCTTTCCTGATAAATGTCGCCTGGGGAAATGAATACGTGGAGCAAA 442
BSNT_02710___ 443 TGCTCCCTATTCTGCAAAAGCACCAGGTTAAAGCTACGTTCTTTTTAGAA 492
||||.|||||||||.|..||||||||||.|||||.||.||||||.|.|||
RBAM_016540__ 443 TGCTGCCTATTCTGAAGCAGCACCAGGTCAAAGCAACTTTCTTTCTTGAA 492
BSNT_02710___ 493 GGCAATTGGGTGAGAAACAATGAAAAGCTCGCTAAGAAGATTGCAAAAGA 542
||.||.|||.|||.|||||||.|..|.||.|..||.||.||.||...|||
RBAM_016540__ 493 GGGAAATGGCTGAAAAACAATCAGGAACTGGGGAAAAAAATAGCGGCAGA 542
BSNT_02710___ 543 CGGACATGAAATCGGAAATCATTCATACAATCATCCGGATATGAGCAAAC 592
|||||||||||||||||||||||||||||||||.||.|||||||||||||
RBAM_016540__ 543 CGGACATGAAATCGGAAATCATTCATACAATCACCCTGATATGAGCAAAC 592
BSNT_02710___ 593 TGACTACAGGAAGAATTTCCGAGCAGCTCGACAAGACTAATGAACAAAT- 641
|||||.|||||||.||||||||.|||||.|||||.||.||||.||||||
RBAM_016540__ 593 TGACTTCAGGAAGCATTTCCGAACAGCTTGACAAAACCAATGCACAAATC 642
BSNT_02710___ 642 ----AGAACAAACGATCGGCGTTAAGCCAAAGTGGTTCGCTCCGCCAAGC 687
|| |||.|||||.|.|||||.||.|||||.||.|||||||||
RBAM_016540__ 643 AGCGAG-----ACGCTCGGCATAAAGCCGAAATGGTTTGCGCCGCCAAGC 687
BSNT_02710___ 688 GGAAGTTTCAGAAAAGCGGTTATCGACATTGCAGCAGAGAAACAGATGGG 737
||.||.|||||||||||.||..||||..|.||.||.||.|||...|||||
RBAM_016540__ 688 GGCAGCTTCAGAAAAGCCGTGGTCGATCTAGCGGCGGAAAAAGGAATGGG 737
BSNT_02710___ 738 AACAGTCATGTGGACAGTTGATACAATCGATTGGCAAAAGCCGGCTCCGT 787
.||..||||||||||.|||||.||.||.||.||||||||.|||.|||||.
RBAM_016540__ 738 CACCATCATGTGGACCGTTGACACCATTGACTGGCAAAAACCGTCTCCGG 787
BSNT_02710___ 788 CTGTACTTCAGACGAGAGTGTTAAGCAAGATACATAATGGTGCCATGATT 837
||||..|.||.||.||.|||||.|||||.||||||||.||.|||||||||
RBAM_016540__ 788 CTGTTTTACAAACAAGGGTGTTGAGCAAAATACATAACGGAGCCATGATT 837
BSNT_02710___ 838 TTAATGCATCCGACTGACCCTACGGCGGAAAGTCTTGAAGCGCTGATTAC 887
|||||||||||||||||.||.||.|||.||||.||.||..|.||||||.|
RBAM_016540__ 838 TTAATGCATCCGACTGATCCGACTGCGAAAAGCCTGGATACACTGATTGC 887
BSNT_02710___ 888 ACAGATAAAAGACAAAGGATATGCGCTTGGAACAGTCACTGAACTAATGG 937
|.|.||.|||||.|||||.||.|||||.||..||||..||||..||||||
RBAM_016540__ 888 AAAAATCAAAGAAAAAGGCTACGCGCTCGGCTCAGTGTCTGACTTAATGG 937
BSNT_02710___ 938 ATGAAACAAGACTATTGAAGTAA 960
||||||..||.||..|||||||.
RBAM_016540__ 938 ATGAAAACAGGCTGATGAAGTAG 960
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