Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02726 and RBAM_016640

See Amino acid alignment / Visit BSNT_02726 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:40
# Commandline: needle
#    -asequence dna-align/BSNT_02726.1.9828.seq
#    -bsequence dna-align/RBAM_016640.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02726-RBAM_016640.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02726-RBAM_016640.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02726
# 2: RBAM_016640
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity:     150/222 (67.6%)
# Similarity:   150/222 (67.6%)
# Gaps:          21/222 ( 9.5%)
# Score: 492.0
# 
#
#=======================================

BSNT_02726         1 ATGATTCTTTATACCGTGATGCCGCAGGAAATTGT-GTTTGCAGAACAGA     49
                     |||||.|||||||||||.|||||.||.|||   || ||||.| |..|||.
RBAM_016640        1 ATGATCCTTTATACCGTCATGCCCCAAGAA---GTCGTTTAC-GGTCAGG     46

BSNT_02726        50 ACCAAGAGACAAGCGCACATGAGCAAATTGAATATAAAGGTGTACCGCTT     99
                     |...||||..|||||..|||||.||..|.||.||....||.||.|||||.
RBAM_016640       47 ATATAGAGCAAAGCGTGCATGAACAGGTAGATTACGCCGGCGTGCCGCTG     96

BSNT_02726       100 CTAGTCGAAATGAAAGGGAATGAAGCGGAAGTCATTCAAATCATGAGCAC    149
                     |||||.||.|||||.||.||||||||.||||||.|.||.||..|.||.||
RBAM_016640       97 CTAGTTGAGATGAAGGGAAATGAAGCTGAAGTCGTACAGATTTTAAGTAC    146

BSNT_02726       150 CAATCCAATGCATTTTCTGCATCCGGACATTTCACCCGGACAA------A    193
                     .||.||.|||.||||..||.||||||||||..|.||.||||||      |
RBAM_016640      147 GAACCCGATGGATTTCTTGAATCCGGACATCGCTCCGGGACAAAAAATCA    196

BSNT_02726       194 AGCTGAAA--TTAAACGTATAA    213
                     ||||||||  .|||        
RBAM_016640      197 AGCTGAAAATCTAA--------    210


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