Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02727 and RBAM_016650
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:40
# Commandline: needle
# -asequence dna-align/BSNT_02727___spoIIIE.1.9828.seq
# -bsequence dna-align/RBAM_016650___ftsK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02727___spoIIIE-RBAM_016650___ftsK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02727___spoIIIE-RBAM_016650___ftsK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02727___spoIIIE
# 2: RBAM_016650___ftsK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2422
# Identity: 1837/2422 (75.8%)
# Similarity: 1837/2422 (75.8%)
# Gaps: 119/2422 ( 4.9%)
# Score: 7062.0
#
#
#=======================================
BSNT_02727___ 1 GTGGCAAAGAAAAAACGAAAATCAAGAAAAAAACAGGCGAAACAGCTAAA 50
|||||||||||||||||.|||||.|.|||.|||||.|.||...||||.||
RBAM_016650__ 1 GTGGCAAAGAAAAAACGGAAATCTAAAAAGAAACAAGAGAGTAAGCTCAA 50
BSNT_02727___ 51 TATAAAATACGAGCTCAACGGATTGCTGTGTATAGCCATTTCAATTATCG 100
|.||||||||||.||.|.||||.||||.|||.|.||.||.||.|||||.|
RBAM_016650__ 51 TCTAAAATACGAACTAAGCGGACTGCTCTGTGTTGCAATCTCGATTATTG 100
BSNT_02727___ 101 CAATCTTGCAGCTGGGGGTAGTCGGGCAAACGTTTATCTATTTGTTCCGC 150
|..|.||||||||.||.||.||.||.||.||.|||.|.||.||||||||.
RBAM_016650__ 101 CTGTTTTGCAGCTCGGCGTTGTGGGACAGACATTTGTGTACTTGTTCCGT 150
BSNT_02727___ 151 TTTTTTGCTGGAGAGTGGTTTATTTTATGCTTGTTAGGTTTATTGGTGTT 200
||||||||.|||||||||||||||||||||||..|.|...|.||..|..|
RBAM_016650__ 151 TTTTTTGCCGGAGAGTGGTTTATTTTATGCTTAATTGCGCTCTTCCTTCT 200
BSNT_02727___ 201 AGGAGTCTCACTGTTTTGGAAGAAAAAAACCCCAAGCCTTTTAACGAGAC 250
.|||.|.||.|||||||||||.||.||.|..||||||||||||||||||.
RBAM_016650__ 201 CGGAATTTCGCTGTTTTGGAAAAAGAAGAGTCCAAGCCTTTTAACGAGAA 250
BSNT_02727___ 251 GAAAGGCCGGGTTGTACTGTATCATCGCAAGCATATTGCTGCTTTCTCAC 300
|||||||.|||.||||||||||.|||||.||.|||||||||||.||||||
RBAM_016650__ 251 GAAAGGCAGGGCTGTACTGTATTATCGCCAGTATATTGCTGCTGTCTCAC 300
BSNT_02727___ 301 GTGCAGCTATTTAAAAATTTGACGCACAAAGGGTCTATTGAGTCTGCAAG 350
||||||||.|||||||||.||.|.||..|.|||||.|||..|||.|||||
RBAM_016650__ 301 GTGCAGCTCTTTAAAAATCTGTCTCATCACGGGTCGATTCGGTCGGCAAG 350
BSNT_02727___ 351 CGTGGTGCGCAATACGTGGGAATTGTTTTTAATGGACATGAATGGCAGC- 399
.||..|..||||.||||||||..|||||.|.||.|||||||| .||||
RBAM_016650__ 351 TGTCATCGGCAACACGTGGGAGCTGTTTATGATTGACATGAA--ACAGCA 398
BSNT_02727___ 400 -TCTGCTTCACCTGATTTAGGCGGAGGGATGATCGGTGCGCTGCTGTTTG 448
.|||||||.||||||||.|||||.||.||||||||.|||.|.|||||||
RBAM_016650__ 399 GGCTGCTTCCCCTGATTTGGGCGGCGGCATGATCGGCGCGGTACTGTTTG 448
BSNT_02727___ 449 CGACTTCACACTTTTTGTTTGCGTCGACTGGTTCTCAGATCATGGCAATT 498
|..||||.||||||||.|||||.||.||.|||||.|||||||||||.||.
RBAM_016650__ 449 CAGCTTCCCACTTTTTATTTGCATCAACGGGTTCACAGATCATGGCGATC 498
BSNT_02727___ 499 GTCATGATTTTGATCGGAATGATTTTAGTAACTGGGCGCTCGCTACAAGA 548
||..||||.||.||.||..|||||.|.|||||.|||||.||.||.||.||
RBAM_016650__ 499 GTGCTGATCTTAATGGGGCTGATTCTTGTAACAGGGCGTTCACTGCAGGA 548
BSNT_02727___ 549 AACGCTAAAAAAGTGGATGAGCCCGATTGGACGTTTTATAAAAGAACAAT 598
||||||.||||||||||.||||||..|.||.||.|||||....|..||.|
RBAM_016650__ 549 AACGCTCAAAAAGTGGACGAGCCCCGTCGGCCGGTTTATCCGCGGCCAGT 598
BSNT_02727___ 599 GGTTAGCATTTATTGATGATATGAAATCCTTCAAATCAAATATACAGTCA 648
||...||||||.||||.||||||||..|..|||.|.|.||||| |||.
RBAM_016650__ 599 GGCAGGCATTTCTTGAGGATATGAAGACGGTCAGAACGAATAT---GTCT 645
BSNT_02727___ 649 TCG------AAAAAAACGAAAGCGCCGAGCAAAAAACAAAAACCGGCCCG 692
||| |.||||||.||| .||.|||||||||||||||.||..|
RBAM_016650__ 646 TCGCCGAAAACAAAAACAAAA---TCGGGCAAAAAACAAAAACGGGTTC- 691
BSNT_02727___ 693 CAAAAAACAGCAAATGGAACCGGAGCCT---CCTGATGAAGAGGGGGATT 739
||.||.|||..||| |||||| ||.||.||||| ||||.
RBAM_016650__ 692 -----AAAAGAAAAAAGAA---GAGCCTGAACCGGAGGAAGA---GGATG 730
BSNT_02727___ 740 ATGAAACAGTATCGCCTCTTATTCATTCAGAGCCGATTATCTCAAGCTTT 789
|.||||...|.|||||..|.||.|||||||||||||||||.|||||||||
RBAM_016650__ 731 AGGAAATTATTTCGCCGATCATCCATTCAGAGCCGATTATTTCAAGCTTT 780
BSNT_02727___ 790 TCTGATCGTAATGAAGAGGAAGAGTCTCCAGTTATAGAAAAGCGCGCCGA 839
||.||.|||.|.|||| |||.||||||
RBAM_016650__ 781 TCAGACCGTCAGGAAG------------------------AGCCCGCCGA 806
BSNT_02727___ 840 ACCTGTGTCGAAGCCGCTTCAGGACATCCAA---CCGGAGAC-------- 878
||| ||.|.|||.|||.| || |.||||||
RBAM_016650__ 807 ACC---------GCTGATTCCGGAAA---AAACGCAGGAGACGGCACAAG 844
BSNT_02727___ 879 -------AGGTGA---------------TCA---------GGAAACTGTT 897
||.||| ||| .|||||.|.|
RBAM_016650__ 845 CGCCAAAAGATGAGCCTTCCGGCGGCGCTCAAGACAGTGGCGAAACGGCT 894
BSNT_02727___ 898 TCTGCTCCTCCTATGACCTTTACAGAGCTCGAAAATAAGGATTACGAGAT 947
.|.|||||.||.|||||.|||||||||||.||||||||.|||||..|.||
RBAM_016650__ 895 GCGGCTCCGCCGATGACGTTTACAGAGCTTGAAAATAAAGATTATCAAAT 944
BSNT_02727___ 948 GCCGTCACTGGATTTGCTGGCAGATCCGAAGCATACCGGCCAGCAGGCTG 997
|||.|||.||||..|.|||||.||.|||||.|||||||||||||||.|.|
RBAM_016650__ 945 GCCTTCATTGGACATACTGGCTGACCCGAAACATACCGGCCAGCAGACCG 994
BSNT_02727___ 998 ATAAAAAGAATATTTATGAAAATGCGAGAAAGCTTGAACGCACATTCCAA 1047
||||.||.||.|||||.||.|||||.|||||.||.|||||.||.||.|||
RBAM_016650__ 995 ATAAGAAAAACATTTACGAGAATGCAAGAAAACTCGAACGGACTTTTCAA 1044
BSNT_02727___ 1048 AGCTTTGGCGTAAAGGCGAAAGTCACACAGGTTCATCTCGGACCGGCCGT 1097
|||||.|||||||||||||||||.||.||||||||||||||.|||||.||
RBAM_016650__ 1045 AGCTTCGGCGTAAAGGCGAAAGTGACGCAGGTTCATCTCGGTCCGGCGGT 1094
BSNT_02727___ 1098 AACAAAATATGAAGTATATCCTGATGTCGGAGTGAAGGTTAGCAAAATTG 1147
.|||||||||||.||.|||||.||.|||||.||.||.||.||.|||||.|
RBAM_016650__ 1095 CACAAAATATGAGGTGTATCCGGACGTCGGGGTCAAAGTCAGTAAAATCG 1144
BSNT_02727___ 1148 TCAATTTAAGCGATGATTTAGCGCTTGCGCTTGCTGCGAAGGATATCAGG 1197
|.|||.|.||||||||..|.|||||.||||||||.||||||||||||.||
RBAM_016650__ 1145 TGAATCTGAGCGATGACCTCGCGCTCGCGCTTGCCGCGAAGGATATCCGG 1194
BSNT_02727___ 1198 ATCGAAGCGCCTATACCAGGCAAATCAGCAATCGGAATTGAAGTTCCAAA 1247
||.||||||||.||.||.||.|||||.||||||||.||.||.||.||.||
RBAM_016650__ 1195 ATAGAAGCGCCGATTCCGGGTAAATCGGCAATCGGCATCGAGGTGCCCAA 1244
BSNT_02727___ 1248 CGCAGAAGTGGCAATGGTTTCGCTGAAAGAAGTGCTGGAGTCTAAATTGA 1297
.||.|||||.||.|||||||||.|.|||||||||||.||.||.||..|.|
RBAM_016650__ 1245 TGCTGAAGTTGCGATGGTTTCGTTAAAAGAAGTGCTTGAATCCAAGCTCA 1294
BSNT_02727___ 1298 ATGACAGACCGGATGCGAAGCTGTTAATTGGACTCGGCCGCAATATTTCA 1347
||||||..|||||.||||||||..|.||.||..|.||.||.||||||||.
RBAM_016650__ 1295 ATGACAAGCCGGACGCGAAGCTTCTGATCGGCTTGGGACGAAATATTTCC 1344
BSNT_02727___ 1348 GGTGAAGCTGTATTGGCTGAGTTAAACAAGATGCCCCACCTTTTGGTCGC 1397
||.|||||.||..|.||.||..|.|||||.|||||||||||..|.||.||
RBAM_016650__ 1345 GGGGAAGCCGTGCTTGCCGAACTGAACAAAATGCCCCACCTGCTCGTAGC 1394
BSNT_02727___ 1398 AGGCGCAACCGGTAGCGGGAAAAGTGTCTGTGTCAACGGCATTATTACAA 1447
.||.|||||.||.|||||.|||||.||||||||||||||.||||||||.|
RBAM_016650__ 1395 GGGGGCAACGGGAAGCGGAAAAAGCGTCTGTGTCAACGGTATTATTACGA 1444
BSNT_02727___ 1448 GTATTTTAATGCGGGCGAAACCGCATGAAGTGAAAATGATGATGATCGAT 1497
|.|||.|.|||.||||.|||||||||||||||||.|||||||||||.||.
RBAM_016650__ 1445 GCATTCTGATGAGGGCCAAACCGCATGAAGTGAAGATGATGATGATTGAC 1494
BSNT_02727___ 1498 CCTAAAATGGTAGAGCTAAATGTCTACAACGGGATTCCGCATTTGCTTGC 1547
||.||||||||.||.||.|||||.||.|||||.|||||.|||.|||||||
RBAM_016650__ 1495 CCGAAAATGGTTGAACTGAATGTGTATAACGGCATTCCTCATCTGCTTGC 1544
BSNT_02727___ 1548 TCCTGTTGTAACCGATCCGAAAAAAGCGTCGCAGGCTTTGAAAAAGGTTG 1597
.||.||.||.||.|||||||||||.||.||||||||||||||||||||.|
RBAM_016650__ 1545 GCCGGTCGTGACAGATCCGAAAAAGGCCTCGCAGGCTTTGAAAAAGGTCG 1594
BSNT_02727___ 1598 TCAATGAAATGGAGCGGCGGTACGAATTATTTTCTCATACGGGTACAAGA 1647
|||||||.||||||||.||.||.||..|.||.||.|||||||||||.|||
RBAM_016650__ 1595 TCAATGAGATGGAGCGCCGCTATGAGCTGTTCTCCCATACGGGTACGAGA 1644
BSNT_02727___ 1648 AATATTGAAGGATACAATGATTATATAAATCGCGCCAACAAT---GAAGA 1694
|||||.|||||.||.||.||..||||.||.|| |.|| ||| |||||
RBAM_016650__ 1645 AATATAGAAGGCTATAACGACCATATTAAGCG-GTCA--AATGCCGAAGA 1691
BSNT_02727___ 1695 AGGAGCGAAACAGCCAGAGCTGCCTTATATTGTTGTCATTGTGGACGAGC 1744
||.||..||.|||||.||||||||.||.||.||.|||||.||.||.||||
RBAM_016650__ 1692 AGAAGTCAAGCAGCCTGAGCTGCCGTACATCGTCGTCATCGTTGATGAGC 1741
BSNT_02727___ 1745 TTGCCGATCTCATGATGGTCGCTTCATCTGATGTGGAAGATTCGATTACG 1794
||||||||||.||||||||||||||.||.||.|||||||||||.||||||
RBAM_016650__ 1742 TTGCCGATCTGATGATGGTCGCTTCTTCCGACGTGGAAGATTCAATTACG 1791
BSNT_02727___ 1795 AGATTGTCCCAAATGGCGCGGGCTGCCGGCATCCATCTTATTATTGCGAC 1844
|||.|.||.||.|||||||||||.||.||.||.|||.|.|||||.|||||
RBAM_016650__ 1792 AGACTTTCACAGATGGCGCGGGCGGCGGGAATTCATTTGATTATCGCGAC 1841
BSNT_02727___ 1845 ACAGCGGCCATCGGTGGATGTTATCACAGGGGTGATCAAAGCGAACATTC 1894
|||||||||.||.||.||||||||.||.||.||.||.|||||.||.||.|
RBAM_016650__ 1842 ACAGCGGCCTTCAGTTGATGTTATTACCGGTGTTATTAAAGCCAATATCC 1891
BSNT_02727___ 1895 CGTCACGAATCGCGTTCAGCGTATCTTCACAGACGGATTCAAGGACCATT 1944
|||||.|||||||.|||||.||.||.||.|||||.||||||.||||.|||
RBAM_016650__ 1892 CGTCAAGAATCGCCTTCAGTGTCTCATCTCAGACCGATTCACGGACGATT 1941
BSNT_02727___ 1945 CTTGACATGGGTGGCGCTGAGAAGCTTCTTGGCCGCGGCGATATGCTGTT 1994
.|.||||||||.||||||||.||||||||.||.|||||.||.||||||||
RBAM_016650__ 1942 TTAGACATGGGCGGCGCTGAAAAGCTTCTGGGGCGCGGAGACATGCTGTT 1991
BSNT_02727___ 1995 TTTACCTGTAGGGGCTAACAAACCTGTCCGTGTGCAGGGAGCATTTTTGT 2044
|.|.||||||||.||.||.||.||.||.||||||||.||.|||||.||.|
RBAM_016650__ 1992 TCTGCCTGTAGGCGCAAATAAGCCGGTGCGTGTGCAAGGGGCATTCTTAT 2041
BSNT_02727___ 2045 CGGATGACGAAGTGGAGAAGGTCGTCGACCATGTGATTACACAGCAGAAA 2094
|.|||||.||.||.|||.|.||||||||.|||||.|||||.|||||.|||
RBAM_016650__ 2042 CCGATGAAGAGGTTGAGCATGTCGTCGATCATGTCATTACGCAGCAAAAA 2091
BSNT_02727___ 2095 GCGCAATATCAAGAAGAAATGATTCCTGAGGAGACG--ACGGAAACTCAT 2142
|||||.||.||||||||.||||||||.|| |||.| .|||||||.||.
RBAM_016650__ 2092 GCGCAGTACCAAGAAGAGATGATTCCGGA--AGAAGTTTCGGAAACACAC 2139
BSNT_02727___ 2143 TCCGAGGTTACTGATGAACTTTATGATGAAGCTGTTGAATTAATCGTCGG 2192
...||.||.||.|||||.||.|||||.|||||.||.||.||.||..||||
RBAM_016650__ 2140 AGTGAAGTAACGGATGATCTCTATGACGAAGCGGTCGATTTGATTATCGG 2189
BSNT_02727___ 2193 CATGCAGACGGCATCTGTTTCAATGCTGCAAAGAAGATTCAGAATTGGCT 2242
|||||||||||||||.||.||.|||||.|||||..|.||||||||.||.|
RBAM_016650__ 2190 CATGCAGACGGCATCAGTCTCCATGCTCCAAAGGCGGTTCAGAATCGGAT 2239
BSNT_02727___ 2243 ATACGAGAGCGGCGCGCCTGATTGACGCAATGGAGGAACGCGGTGTTGTC 2292
||||||||||.||.||.|||||||||||||||||||||||.||.||.|||
RBAM_016650__ 2240 ATACGAGAGCTGCCCGTCTGATTGACGCAATGGAGGAACGGGGCGTCGTC 2289
BSNT_02727___ 2293 GGACCGTATGAAGGCAGCAAACCTAGGGAAGTATTATTATCAAAAGAGAA 2342
||.|||||||||||.||||||||.|||||||||.|||||||.||.||..|
RBAM_016650__ 2290 GGGCCGTATGAAGGAAGCAAACCGAGGGAAGTACTATTATCTAAGGAACA 2339
BSNT_02727___ 2343 ATATGATGAGCTCTCTTCTTAA 2364
||||||||||||||||||||||
RBAM_016650__ 2340 ATATGATGAGCTCTCTTCTTAA 2361
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