Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02744 and RBAM_016810

See Amino acid alignment / Visit BSNT_02744 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:42
# Commandline: needle
#    -asequence dna-align/BSNT_02744___ymdB.1.9828.seq
#    -bsequence dna-align/RBAM_016810___ymdB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02744___ymdB-RBAM_016810___ymdB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02744___ymdB-RBAM_016810___ymdB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02744___ymdB
# 2: RBAM_016810___ymdB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 799
# Identity:     648/799 (81.1%)
# Similarity:   648/799 (81.1%)
# Gaps:           8/799 ( 1.0%)
# Score: 2626.0
# 
#
#=======================================

BSNT_02744___      1 ATGAGAATTTTATTTATCGGAGATGTTGTCGGTTCACCGGGCCGTGACAT     50
                     |||||||||||||||||||||||||||||||||||.||||||||.|||||
RBAM_016810__      1 ATGAGAATTTTATTTATCGGAGATGTTGTCGGTTCCCCGGGCCGCGACAT     50

BSNT_02744___     51 GGTCAAAGAATATGTACCAAAGCTAAAAACAAAATATAAGCCTCACTTTA    100
                     |||.|||||||||||.||.||.||.|||.|.|||.||||.||.||.||||
RBAM_016810__     51 GGTAAAAGAATATGTCCCGAAACTGAAAGCGAAACATAAACCGCATTTTA    100

BSNT_02744___    101 CCATTATTAATGGTGAAAACGCCGCACATGGAAAAGGCCTGACGGAAAAA    150
                     |.||||||||.||.|||||.||.|||||.||||||||.|||||.|||||.
RBAM_016810__    101 CAATTATTAACGGAGAAAATGCAGCACACGGAAAAGGACTGACAGAAAAG    150

BSNT_02744___    151 ATTTATCACAGATTAATCCAGTCCGGCGCAGATGCAATCACAATGGGGAA    200
                     ||.||.|||||..|.||..|..|.||.||||||||.||.||||||||.||
RBAM_016810__    151 ATCTACCACAGCCTGATGGAAGCGGGAGCAGATGCCATTACAATGGGAAA    200

BSNT_02744___    201 CCATACATGGGACAAAAAAGAAATATTTGATTTTATAGATGACGTTCCG-    249
                     ||||||||||||.||||.|||.||.||.||.|||||.|||||.||.||| 
RBAM_016810__    201 CCATACATGGGATAAAAGAGAGATCTTCGACTTTATTGATGATGTGCCGC    250

BSNT_02744___    250 AACTTGGTTCGCCCGGCAAACTTTCCTGAAGGAACACCGGGGAAAGGGAT    299
                     |.||| ||.||.|||||.||.||.||.|||||.||.|||||.|||||.||
RBAM_016810__    251 ATCTT-GTCCGGCCGGCGAATTTCCCGGAAGGTACGCCGGGCAAAGGCAT    299

BSNT_02744___    300 CACATATGTGAAAGCAAACGGCAAAGAACTAGCAGTCATTAATTTGCAGG    349
                     .||.|||.|.|||.|.|||||.|||||.||.||.|||||||||||.||||
RBAM_016810__    300 TACTTATATTAAATCGAACGGAAAAGAGCTTGCCGTCATTAATTTACAGG    349

BSNT_02744___    350 GACGTACGTTTTTGCCGCCGCTTGATGACCCGTTTTTAAAAGCGGATGAA    399
                     |.||.||||||.|.||||||||||||||.||||||...||||||||||||
RBAM_016810__    350 GGCGGACGTTTCTTCCGCCGCTTGATGATCCGTTTGCTAAAGCGGATGAA    399

BSNT_02744___    400 TTGATCGCAGAAGCTGCGAAAA---GAACACCGTACATTTTTATCGACTT    446
                     ||.||   |||||..|||||||   |.||.||||||||||||||.||.||
RBAM_016810__    400 TTAAT---AGAAGAAGCGAAAAAGCGCACGCCGTACATTTTTATTGATTT    446

BSNT_02744___    447 TCATGCCGAAGCGACAAGTGAAAAGCTCGCACTTGGCTGGTACACGGATG    496
                     |||.||||||||||||||.|||||..|.||..|.|||||||||||.||.|
RBAM_016810__    447 TCACGCCGAAGCGACAAGCGAAAAAATTGCGATCGGCTGGTACACAGACG    496

BSNT_02744___    497 GGAGGGCGTCGGCTGTAGTAGGAACTCATACACACGTGCAAACGGCGGAT    546
                     |.||.||.||.||.||.|||||.||.||||||||||||||||||||.|||
RBAM_016810__    497 GAAGAGCCTCTGCCGTGGTAGGCACCCATACACACGTGCAAACGGCAGAT    546

BSNT_02744___    547 AACCGCATTTTGCCGAAGGGAACGGCATATATTACTGATGTGGGAATGAC    596
                     |||||||||||||||||.|||||||||||||||||||||||.||.|||||
RBAM_016810__    547 AACCGCATTTTGCCGAAAGGAACGGCATATATTACTGATGTTGGCATGAC    596

BSNT_02744___    597 TGGCCCATATGACGGTATACTGGGGATGGACAGAGAGACGATTATTAAGC    646
                     .||.||.||.|||||.||.||.||.|||||||||||.||..|.||.||||
RBAM_016810__    597 GGGTCCGTACGACGGAATTCTCGGTATGGACAGAGAAACCGTCATCAAGC    646

BSNT_02744___    647 GATTCAAAACGAACCTTCCAGTCCGGTTTACTGTCGCTGAAGGAAAAACA    696
                     |.||.|||||.||.|||||.|||||||||||.||.||.|||||.|||||.
RBAM_016810__    647 GGTTTAAAACCAATCTTCCCGTCCGGTTTACGGTGGCGGAAGGTAAAACT    696

BSNT_02744___    697 ACGCTCAGCGGAGTTGTGATTGACATTGACGATCAAACGAAAAAAGCCGT    746
                     |||||.||||||||..|.||.|||||.|||||||||||||||||.|||||
RBAM_016810__    697 ACGCTGAGCGGAGTGCTCATAGACATCGACGATCAAACGAAAAAGGCCGT    746

BSNT_02744___    747 GAAAATTGAGCGTATTTTAATCAACGATGATCACATGTTCTTTGAATAG    795
                     .||.||.||.||.||.||||||||.|||||.||.|||||||||||||||
RBAM_016810__    747 AAATATCGAACGGATATTAATCAATGATGACCATATGTTCTTTGAATAG    795


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