Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02749 and RBAM_016850
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:42
# Commandline: needle
# -asequence dna-align/BSNT_02749___ymcB.1.9828.seq
# -bsequence dna-align/RBAM_016850___ymcB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02749___ymcB-RBAM_016850___ymcB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02749___ymcB-RBAM_016850___ymcB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02749___ymcB
# 2: RBAM_016850___ymcB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1533
# Identity: 1282/1533 (83.6%)
# Similarity: 1282/1533 (83.6%)
# Gaps: 6/1533 ( 0.4%)
# Score: 5389.0
#
#
#=======================================
BSNT_02749___ 1 ATGAATGAAAAACAAAAATTAGAGAGCGGACAAGTTAATCCATCGGACAA 50
|||||||||||.|||||....||.|||||||||||.|||||..|||||||
RBAM_016850__ 1 ATGAATGAAAAGCAAAAGCAGGAAAGCGGACAAGTGAATCCGGCGGACAA 50
BSNT_02749___ 51 AAAATCCGAGAAGGATTACAGCAAGTACTTTGAAGCTGTTTACATTCCGC 100
||.||||||.|||||||||||||||||.||||||||.||.||.|||||||
RBAM_016850__ 51 AACATCCGAAAAGGATTACAGCAAGTATTTTGAAGCCGTATATATTCCGC 100
BSNT_02749___ 101 CTTCTTTAAAAGACGCGAAAAAACGAGGCAAGGAAGCCGTTACTTATCAT 150
|||||||||||||.|||||||||||.|||||.|||.|||||...||||||
RBAM_016850__ 101 CTTCTTTAAAAGATGCGAAAAAACGGGGCAAAGAATCCGTTCAATATCAT 150
BSNT_02749___ 151 AATGACTTTAAAATTTCTGAACAATTTAAAGGATTGGGAGACGGAAGAAA 200
||.||.||||||||.||.|||.||||||||||..|.||.||.||.||.||
RBAM_016850__ 151 AACGATTTTAAAATCTCAGAAGAATTTAAAGGCCTCGGTGAAGGCAGGAA 200
BSNT_02749___ 201 GTTCTATATCCGTACGTACGGCTGCCAAATGAATGAACACGATACAGAGG 250
.||.||||||||.||||||||.|||||||||||.||.||.|||||.||.|
RBAM_016850__ 201 ATTTTATATCCGCACGTACGGATGCCAAATGAACGAGCATGATACGGAAG 250
BSNT_02749___ 251 TTATGGCAGGGATCTTTATGGCGCTCGGTTACGAAGCGACAAACTCTGTT 300
|.|||||.||.||.|||||||||||||||||.|||||||||||.||.|||
RBAM_016850__ 251 TCATGGCGGGTATTTTTATGGCGCTCGGTTATGAAGCGACAAATTCGGTT 300
BSNT_02749___ 301 GACGATGCCAATGTCATTTTGTTAAATACATGTGCAATCCGTGAAAATGC 350
||.||.||.||.||.|||||.|||||.||.||.||.|||||.||||||||
RBAM_016850__ 301 GATGACGCGAACGTTATTTTATTAAACACTTGCGCTATCCGGGAAAATGC 350
BSNT_02749___ 351 TGAAAACAAGGTGTTTGGTGAGCTCGGGCACTTAAAAGCACTGAAAAAAA 400
|||||||||.|||||.||.||||||||.||.|||||.||.||.|||||||
RBAM_016850__ 351 TGAAAACAAAGTGTTCGGAGAGCTCGGCCATTTAAAGGCGCTCAAAAAAA 400
BSNT_02749___ 401 ACAATCCCGATCTAATTTTAGGCGTGTGCGGCTGTATGTCCCAAGAGGAA 450
|.||.||.||..|.|||.|.|||||.||||||||.|||||.||.||.|||
RBAM_016850__ 401 ATAACCCGGACTTGATTCTCGGCGTCTGCGGCTGCATGTCACAGGAAGAA 450
BSNT_02749___ 451 TCAGTCGTGAACCGTATTTTGAAAAAACATCCGTTTGTCGATATGATTTT 500
||||||||.|||||.||..|.||.||.||.||||||||||||||||||||
RBAM_016850__ 451 TCAGTCGTAAACCGCATCCTTAAGAAGCACCCGTTTGTCGATATGATTTT 500
BSNT_02749___ 501 CGGAACGCATAACATTCATCGCCTGCCGGAGCTTTTGTCAGAAGCATACC 550
|||.|||||.||||||||.||.||||||||.||.||.|||||.|||||..
RBAM_016850__ 501 CGGCACGCACAACATTCACCGTCTGCCGGAACTGTTATCAGAGGCATATT 550
BSNT_02749___ 551 TTTCAAAAGAAATGGTTGTAGAAGTTTGGTCTAAGGAAGGGGACGTTATT 600
|.||||||||.|||||..|.|||||.|||||.|||||||||||.||.|||
RBAM_016850__ 551 TATCAAAAGAGATGGTCATTGAAGTGTGGTCGAAGGAAGGGGATGTCATT 600
BSNT_02749___ 601 GAAAACCTTCCGAAAGTCCGAAATGGAAAAATTAAGGGCTGGGTCAATAT 650
||||||||||||||||||||.||.|||||||||||.|||||||||||.||
RBAM_016850__ 601 GAAAACCTTCCGAAAGTCCGCAACGGAAAAATTAAAGGCTGGGTCAACAT 650
BSNT_02749___ 651 CATGTACGGCTGTGACAAATTCTGTACGTATTGCATTGTGCCTTACACAC 700
.|||||||||||||||||.|||||.||.||.|||||.||.||.||.||.|
RBAM_016850__ 651 TATGTACGGCTGTGACAAGTTCTGCACATACTGCATCGTACCGTATACCC 700
BSNT_02749___ 701 GCGGAAAAGAAAGAAGCCGCCGCCCTGAGGATATCATTCAGGAAGTGAGA 750
|||||||||||.||||||||||.||||||||.||.||.||||||||.|||
RBAM_016850__ 701 GCGGAAAAGAACGAAGCCGCCGTCCTGAGGAAATTATCCAGGAAGTCAGA 750
BSNT_02749___ 751 AGGCTTGCAAGTGAAGGCTATAAGGAAATTACACTGTTAGGCCAAAATGT 800
||.||||||||.|||||.|||||.|||||.||.|||.|.||.|||||.||
RBAM_016850__ 751 AGACTTGCAAGCGAAGGTTATAAAGAAATCACGCTGCTCGGTCAAAACGT 800
BSNT_02749___ 801 AAACGCGTATGGAAAAGACTTTGAAGATATGACTTACGGACTTGGTGATT 850
.||.|||||.||||||||.|||||.||||||||.||||||||.|||||||
RBAM_016850__ 801 GAATGCGTACGGAAAAGATTTTGAGGATATGACGTACGGACTCGGTGATT 850
BSNT_02749___ 851 TGATGGATGAACTGAGAAAAATCGATATCCCGAGAATCCGTTTTACAACG 900
|.|||||.||||||.|.|||||.|||||.|||||||||||.||.||.|||
RBAM_016850__ 851 TAATGGACGAACTGCGCAAAATTGATATTCCGAGAATCCGATTCACGACG 900
BSNT_02749___ 901 AGTCATCCGCGCGACTTTGACGACCGCCTCATTGAAGTGCTTGCAAAAGG 950
|||||||||||.||||||||.||.|..||.||.||||||||.||.|||||
RBAM_016850__ 901 AGTCATCCGCGTGACTTTGATGATCATCTGATCGAAGTGCTCGCCAAAGG 950
BSNT_02749___ 951 CGGAAATCTGCTTGATCACATTCATCTTCCGGTTCAATCAGGAAGCTCA- 999
|||.||.||.|||||.||.||.|||||||||||||||||||||||||||
RBAM_016850__ 951 CGGCAACCTTCTTGACCATATCCATCTTCCGGTTCAATCAGGAAGCTCAG 1000
BSNT_02749___ 1000 -GAAGTTCTGAAGCTGATGGCCCGCAAATATGACAGAGAGCGTTACATGG 1048
||.|| |.||..|||||||.|||||||||||||||||.||.||..|||
RBAM_016850__ 1001 CGATGT--TAAAAATGATGGCGCGCAAATATGACAGAGAACGCTATCTGG 1048
BSNT_02749___ 1049 AGCTGGTGCGAAAAA-TAAAGACAGCGATGCCAAACGCTTCTTTGACAAC 1097
||||.||..|||||| ||||| |.||||||||.||||||||..||||.||
RBAM_016850__ 1049 AGCTTGTCGGAAAAATTAAAG-CGGCGATGCCGAACGCTTCACTGACGAC 1097
BSNT_02749___ 1098 GGACATTATCGTCGGATTTCCAAATGAAACGGACGAACAGTTTGAAGAAA 1147
.||.|||||.|||||.|||||.||||||||.||.|||||.||||||||||
RBAM_016850__ 1098 CGATATTATTGTCGGTTTTCCGAATGAAACCGATGAACAATTTGAAGAAA 1147
BSNT_02749___ 1148 CGCTTTCTCTATACCGTGAAGTGGAGTTTGACAGCGCCTATACGTTCATT 1197
|||||||..||||.||.||||||||.|||||||||||.||||||||.|||
RBAM_016850__ 1148 CGCTTTCGTTATATCGCGAAGTGGAATTTGACAGCGCATATACGTTTATT 1197
BSNT_02749___ 1198 TACTCTCCGCGTGAGGGCACTCCGGCTGCTAAGATGAAAGATAATGTACC 1247
||||||||.|||||.|||||.|||||.||.|||||||||||.|||||.||
RBAM_016850__ 1198 TACTCTCCTCGTGAAGGCACGCCGGCAGCGAAGATGAAAGACAATGTTCC 1247
BSNT_02749___ 1248 GATGCGTGTGAAAAAAGAACGCCTGCAGCGTCTAAACGCACTGGTGAATG 1297
||||.|.||.||.||||||||.||.|||||.||.||.|...|||||||.|
RBAM_016850__ 1248 GATGAGGGTAAAGAAAGAACGTCTTCAGCGCCTCAATGATTTGGTGAAAG 1297
BSNT_02749___ 1298 AAATTTCTGCTAAAAAAATGAAGGAATACGAAGGCAAGGTTGTCGAAGTA 1347
|||||||.||.|||||||||||||||||.|||||||.|..||||||||||
RBAM_016850__ 1298 AAATTTCAGCCAAAAAAATGAAGGAATATGAAGGCAGGACTGTCGAAGTA 1347
BSNT_02749___ 1348 TTAGTTGAGGGTGAAAGCAAAAATAACCCTGATATTCTTGCCGGCTATAC 1397
|||||||||||.||||||||||||||||||||.|||||||||||||||||
RBAM_016850__ 1348 TTAGTTGAGGGAGAAAGCAAAAATAACCCTGACATTCTTGCCGGCTATAC 1397
BSNT_02749___ 1398 GGAAAAAAGCAAGCTTGTCAATTTCAAAGGGCCGAAGGAAGCCATCGGCA 1447
|||||||||||||||.|||||.||||||||||||||.||.||||||||||
RBAM_016850__ 1398 GGAAAAAAGCAAGCTCGTCAACTTCAAAGGGCCGAAAGACGCCATCGGCA 1447
BSNT_02749___ 1448 AAATCGTCCGCGTGAAAATCCAGCAAGCGAAAACATGGTCGCTTGACGGA 1497
|.||.||.|||||.||||||.|.||.|||||||||||||||||||||||.
RBAM_016850__ 1448 AGATTGTACGCGTCAAAATCGAACAGGCGAAAACATGGTCGCTTGACGGT 1497
BSNT_02749___ 1498 GAAATGGTAGGAGAAGCAATCGAGGTGAAATAA 1530
|..||||.|||||||||||||||||||||||||
RBAM_016850__ 1498 GTGATGGCAGGAGAAGCAATCGAGGTGAAATAA 1530
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