Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02753 and RBAM_016870

See Amino acid alignment / Visit BSNT_02753 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:43
# Commandline: needle
#    -asequence dna-align/BSNT_02753___cotE.1.9828.seq
#    -bsequence dna-align/RBAM_016870___cotE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02753___cotE-RBAM_016870___cotE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02753___cotE-RBAM_016870___cotE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02753___cotE
# 2: RBAM_016870___cotE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 547
# Identity:     465/547 (85.0%)
# Similarity:   465/547 (85.0%)
# Gaps:           2/547 ( 0.4%)
# Score: 1985.0
# 
#
#=======================================

BSNT_02753___      1 ATGTCTGAATACAGGGAAATTATTACGAAGGCAGTAGTAGCGAAAGGCCG     50
                     |||||||||||||||||||||||||||||.||.|||||.||||||||..|
RBAM_016870__      1 ATGTCTGAATACAGGGAAATTATTACGAAAGCGGTAGTTGCGAAAGGAAG     50

BSNT_02753___     51 AAAATTCACCCAATGCACCAACACCATCTCGCCTGAGA-AAAAACCGAGC     99
                     ||||||||||||||||||||||||.|||||.|||| || ||||||||...
RBAM_016870__     51 AAAATTCACCCAATGCACCAACACGATCTCACCTG-GAGAAAAACCGTCA     99

BSNT_02753___    100 AGCATTTTGGGTGGTTGGATTATTAACCACAAGTATGACGCTGAAAAAAT    149
                     ||.||.|||||.||.||||||||.|||||||||||.||.||.|||||.||
RBAM_016870__    100 AGTATATTGGGCGGCTGGATTATCAACCACAAGTACGATGCCGAAAAGAT    149

BSNT_02753___    150 TGGAAAAACGGTAGAAATTGAAGGGTATTATGATATAAACGTATGGTACT    199
                     .||.||.||.||||||||||||||||||||||||||||||||.|||||||
RBAM_016870__    150 CGGGAAGACTGTAGAAATTGAAGGGTATTATGATATAAACGTCTGGTACT    199

BSNT_02753___    200 CTTACGCGGACAACACAAAGACAGAGGTTGTCACAGAACGGGTAAAATAT    249
                     |||||||.||.||.|||||.|||||.|||||.||.||..|.|||||.|||
RBAM_016870__    200 CTTACGCCGATAATACAAAAACAGAAGTTGTAACCGAGAGAGTAAAGTAT    249

BSNT_02753___    250 GTAGATGTCATTAAACTCAGATACAGAGACAATAATTACTTAGATGATGA    299
                     ||.|||||.||||||||||||||||||||||..||||||||||||||.||
RBAM_016870__    250 GTCGATGTGATTAAACTCAGATACAGAGACACAAATTACTTAGATGACGA    299

BSNT_02753___    300 GCATGAAGTGATTGCCAAAGTGCTTCAGCAGCCAAACTGCCTTGAAGTGA    349
                     .||.|||||.||||||||||||||.||||||||.||.||.||||||||.|
RBAM_016870__    300 ACACGAAGTCATTGCCAAAGTGCTGCAGCAGCCGAATTGTCTTGAAGTCA    349

BSNT_02753___    350 CCATTTCGCCGAATGGAAATAAAATCGTTGTGCAGGCAGAAAGAGAATTT    399
                     |||||||.||.||.||||||||||||||.||.||||||||.|||||||||
RBAM_016870__    350 CCATTTCTCCTAACGGAAATAAAATCGTGGTTCAGGCAGAGAGAGAATTT    399

BSNT_02753___    400 TTGGCGGAAGTGGTAGGGGAAACAAAGGTAGTTGTTGAGGTCAATCCTGA    449
                     ||.||.||||||||.||.|||||.||.||.||.||.||.|||||||||||
RBAM_016870__    400 TTAGCAGAAGTGGTCGGTGAAACGAAAGTCGTCGTCGAAGTCAATCCTGA    449

BSNT_02753___    450 CTGGGAAGAGGATGACGAGGAAGATTGGGAAGATGAGCTTGATGAAGAGC    499
                     .||||||||.||.||.||.||.|||||||||||.||.|||||||||||..
RBAM_016870__    450 TTGGGAAGAAGACGATGATGATGATTGGGAAGACGATCTTGATGAAGAAT    499

BSNT_02753___    500 TTGAAGACATCAACCCGGAGTTTTTAGTGGGAGATCCTGAAGAATAA    546
                     |.||.|||||.|||||.||.||||||||.||||||||||||||||||
RBAM_016870__    500 TAGAGGACATTAACCCTGAATTTTTAGTCGGAGATCCTGAAGAATAA    546


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