Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02784 and RBAM_017100

See Amino acid alignment / Visit BSNT_02784 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:44
# Commandline: needle
#    -asequence dna-align/BSNT_02784___ebrB.1.9828.seq
#    -bsequence dna-align/RBAM_017100___ebrB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02784___ebrB-RBAM_017100___ebrB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02784___ebrB-RBAM_017100___ebrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02784___ebrB
# 2: RBAM_017100___ebrB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity:     256/373 (68.6%)
# Similarity:   256/373 (68.6%)
# Gaps:          38/373 (10.2%)
# Score: 831.0
# 
#
#=======================================

BSNT_02784___      1 ATGAGAGGATTGCTTTATTTGGCTCTCGCCATTGTATCTGAAGTGTTTGG     50
                     ||||.||||||.||||..|||||..|.|||||||||||.||||||||.||
RBAM_017100__      1 ATGAAAGGATTACTTTGCTTGGCATTAGCCATTGTATCAGAAGTGTTCGG     50

BSNT_02784___     51 GAGCACGATGTTGAAGCTTTCAGAAGGATTTACACAAGCC--TGGCCCAT     98
                     ||||||||||.|||||||.||.||.||.|||||.||  ||  ||||||..
RBAM_017100__     51 GAGCACGATGCTGAAGCTGTCGGACGGTTTTACGCA--CCTGTGGCCCGC     98

BSNT_02784___     99 TGCCGGAGTCATAGTCGGATTTCTTTCTG-----CTTTTACGTTTCTAAG    143
                     |..|||.|||||.|.||||     .||.|     ||||||.||||.|.||
RBAM_017100__     99 TCTCGGCGTCATTGCCGGA-----ATCGGAGCCTCTTTTATGTTTTTGAG    143

BSNT_02784___    144 CTTTTCTTTAAAAACAATTGACTTATCAAGCGCGTATGCAACATGGTCGG    193
                     |||.||.||.||||...||||.|||||...|||.||.||.||||||||.|
RBAM_017100__    144 CTTCTCATTGAAAAGCCTTGATTTATCCGCCGCATACGCGACATGGTCAG    193

BSNT_02784___    194 GCGTTGGTACCGCGCTTACAGCAATTGTCGGGTTTTTGCTTTTTGGCGAA    243
                     |.||.||.|||||..|.||.|||||||||||.|||||..|||||...||.
RBAM_017100__    194 GTGTCGGCACCGCTTTAACGGCAATTGTCGGCTTTTTTGTTTTTAAGGAG    243

BSNT_02784___    244 ACCAT--CAGTTTAAAAGGTGTATTCGGTCTCACGCTT------GTCATT    285
                     .||||  ||||..|||.|.||  .||||      ||||      |||||.
RBAM_017100__    244 GCCATGACAGTCAAAATGATG--ATCGG------GCTTGTTTTGGTCATC    285

BSNT_02784___    286 GCAGGCGTGATCGTGCTAAATCAATCGAAAGCCC---ACGCTGAAGATAA    332
                     .|.|||||.|||.||||.||.|..||.||..|.|   |.|||.||   ||
RBAM_017100__    286 ACGGGCGTCATCCTGCTGAACCGTTCCAAGTCTCAAAAAGCTAAA---AA    332

BSNT_02784___    333 AAAACAGACGGCCTGTGAG-TGA    354
                     |||.||.||||||.| ||| |||
RBAM_017100__    333 AAATCAAACGGCCCG-GAGCTGA    354


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