Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02789 and RBAM_017140
See
Amino acid alignment /
Visit
BSNT_02789 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence dna-align/BSNT_02789___hfq.1.9828.seq
# -bsequence dna-align/RBAM_017140___hfq.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02789___hfq-RBAM_017140___hfq.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02789___hfq-RBAM_017140___hfq.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02789___hfq
# 2: RBAM_017140___hfq
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 222
# Identity: 194/222 (87.4%)
# Similarity: 194/222 (87.4%)
# Gaps: 0/222 ( 0.0%)
# Score: 858.0
#
#
#=======================================
BSNT_02789___ 1 ATGAAACCGATTAATATTCAGGATCAGTTTTTGAATCAAATCCGGAAAGA 50
||||||||||||||||||||.|||||||||||||||||||||||.|||||
RBAM_017140__ 1 ATGAAACCGATTAATATTCAAGATCAGTTTTTGAATCAAATCCGAAAAGA 50
BSNT_02789___ 51 AAATACGTATGTCACTGTTTTTTTGCTGAACGGCTTTCAGTTGCGGGGCC 100
.|||||||..|||||.||.|||||.||.||||||||.|||.|.||.||||
RBAM_017140__ 51 CAATACGTTCGTCACGGTGTTTTTACTCAACGGCTTCCAGCTTCGCGGCC 100
BSNT_02789___ 101 AGGTGAAAGGCTTTGATAACTTTACCGTATTGTTGGAATCGGAAGGTAAG 150
||||.|||||||||||.|||||||||||.|||.|.|||.||||.||.|||
RBAM_017140__ 101 AGGTAAAAGGCTTTGACAACTTTACCGTTTTGCTCGAAACGGAGGGGAAG 150
BSNT_02789___ 151 CAGCAGCTTATATATAAACATGCGATCTCAACGTTTGCGCCGCAAAAAAA 200
|||||||||||.|||||||||||.|||||.|||||.||.|||||||||||
RBAM_017140__ 151 CAGCAGCTTATTTATAAACATGCCATCTCCACGTTCGCCCCGCAAAAAAA 200
BSNT_02789___ 201 CGTCCAGCTTGAACTCGAATAG 222
||||||||||||.||.||||||
RBAM_017140__ 201 CGTCCAGCTTGAGCTTGAATAG 222
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.