Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02794 and RBAM_017180
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:45
# Commandline: needle
# -asequence dna-align/BSNT_02794___nrdE.1.9828.seq
# -bsequence dna-align/RBAM_017180___nrdE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02794___nrdE-RBAM_017180___nrdE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02794___nrdE-RBAM_017180___nrdE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02794___nrdE
# 2: RBAM_017180___nrdE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2103
# Identity: 1832/2103 (87.1%)
# Similarity: 1832/2103 (87.1%)
# Gaps: 0/2103 ( 0.0%)
# Score: 8076.0
#
#
#=======================================
BSNT_02794___ 1 TTGTCACAAAATCAAGTGCCAAAATGGATCCAGTTAAATAACGAAATCAT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_017180__ 1 TTGTCACAAAATCAAGTGCCAAAATGGATCCAGTTAAATAACGAAATCAT 50
BSNT_02794___ 51 GATCCAAAAAGATGGAAAATTCCAGTTTGATAAGGATAAAGAGGCTGTAC 100
|||||||.|||||||||||||||||||||||||.||||||||||||||||
RBAM_017180__ 51 GATCCAACAAGATGGAAAATTCCAGTTTGATAAAGATAAAGAGGCTGTAC 100
BSNT_02794___ 101 ATAGCTATTTTGTAGATTATATCAATCAAAACACAGTCTTCTTTCACGAT 150
|||||||||||||.||.||||||||||||||||||||.|.||||||||||
RBAM_017180__ 101 ATAGCTATTTTGTTGACTATATCAATCAAAACACAGTTTACTTTCACGAT 150
BSNT_02794___ 151 TTAAAAGAGAAGCTGGATTATTTGGTTGAAAATCAATACTACGAAGAGGA 200
||||||||||||||||||||||||.|||||||.|||||||||||||||||
RBAM_017180__ 151 TTAAAAGAGAAGCTGGATTATTTGATTGAAAACCAATACTACGAAGAGGA 200
BSNT_02794___ 201 ATTCTTAAGCCTTTATTCTTTTGAAGACATTAAAGAAGTGTTTAAGACAG 250
|||||||||||||||.||||||||||||||||||||||||||||||||||
RBAM_017180__ 201 ATTCTTAAGCCTTTACTCTTTTGAAGACATTAAAGAAGTGTTTAAGACAG 250
BSNT_02794___ 251 CTTACGCTAAGAAGTTTCGTTTTCCTTCCTTCATGAGTGCGTTTAAATTC 300
|||||||.|||||||||||||||||||||||||||||||||||||||||.
RBAM_017180__ 251 CTTACGCAAAGAAGTTTCGTTTTCCTTCCTTCATGAGTGCGTTTAAATTT 300
BSNT_02794___ 301 TATAATGACTATGCTTTGAAAACGAATGACAAGAAAAAAATCCTCGAGCG 350
|||||||||||||||||||||||||||||||||||||.||||||||||||
RBAM_017180__ 301 TATAATGACTATGCTTTGAAAACGAATGACAAGAAAAGAATCCTCGAGCG 350
BSNT_02794___ 351 TTATGAGGACCGGATCTCAATTGTTGCGCTGTTCTTCGCTAACGGCGACA 400
||||||||||||.||||||||.||.||||||||||||||.||||||||||
RBAM_017180__ 351 TTATGAGGACCGAATCTCAATCGTCGCGCTGTTCTTCGCAAACGGCGACA 400
BSNT_02794___ 401 CTGAGAAAGCAAAAGAATATGTAAACCTGATGATCAATCAAGAATATCAG 450
|||||||||||||||||||||||||||||||||||||.||.|||||||||
RBAM_017180__ 401 CTGAGAAAGCAAAAGAATATGTAAACCTGATGATCAACCAGGAATATCAG 450
BSNT_02794___ 451 CCGAGCACACCGACATTTCTGAACGCCGGCAGAAAACGCCGCGGTGAACT 500
|||||.||||||||||||.||||.||||||||||||||||||||.|||||
RBAM_017180__ 451 CCGAGTACACCGACATTTTTGAATGCCGGCAGAAAACGCCGCGGAGAACT 500
BSNT_02794___ 501 TGTGAGCTGCTTCTTGCTGGAAGTCAATGATTCCTTAAACGACATTTCAA 550
.|||||||||||||||||.|||||||||||||||||||||||.||||||.
RBAM_017180__ 501 GGTGAGCTGCTTCTTGCTCGAAGTCAATGATTCCTTAAACGATATTTCAC 550
BSNT_02794___ 551 GAGCGATCGATATCTCCATGCAGCTTTCTAAACTGGGCGGAGGGGTTTCT 600
|.|||||||||||.|||||||||||.||||||.|||||||.|||||||||
RBAM_017180__ 551 GGGCGATCGATATTTCCATGCAGCTGTCTAAATTGGGCGGCGGGGTTTCT 600
BSNT_02794___ 601 CTTAACCTGTCCAAGCTTCGCGCGAAAGGTGAAGCCATTAAAGATGTTGA 650
|||||.|||||||||||||||||||||||.|||||.||||||||||||||
RBAM_017180__ 601 CTTAATCTGTCCAAGCTTCGCGCGAAAGGCGAAGCGATTAAAGATGTTGA 650
BSNT_02794___ 651 GAATGCGACAAAAGGCGTTGTAGGCGTCATGAAGCTTCTTGATAACGCGT 700
.||.||.||||||||.|||||||||||||||||||||||||||||.||||
RBAM_017180__ 651 AAACGCCACAAAAGGTGTTGTAGGCGTCATGAAGCTTCTTGATAATGCGT 700
BSNT_02794___ 701 TCCGTTACGCTGACCAAATGGGACAAAGACAAGGATCCGGCGCGGCGTAT 750
||||||||||||||||||||||.|||||||||||.||.||||||||||||
RBAM_017180__ 701 TCCGTTACGCTGACCAAATGGGCCAAAGACAAGGCTCAGGCGCGGCGTAT 750
BSNT_02794___ 751 TTAAACATTTTCCACCGCGATATCAATGATTTTCTCGATACGAAAAAGAT 800
|||||.|||||||||||||||||||||||||||||.||||||||||||||
RBAM_017180__ 751 TTAAATATTTTCCACCGCGATATCAATGATTTTCTTGATACGAAAAAGAT 800
BSNT_02794___ 801 TTCTGCGGATGAAGATGTGCGTGTCAAAACGCTTTCGATCGGTGTTGTCA 850
|||||||||||||||||||||.||||||||||||||.||||||||.||||
RBAM_017180__ 801 TTCTGCGGATGAAGATGTGCGCGTCAAAACGCTTTCTATCGGTGTCGTCA 850
BSNT_02794___ 851 TTCCGGATAAGTTCGTTGAGCTTGCACGCGAGGACAAAGCGGCTTATGTA 900
||||||||||||||||||||||||||||.|||||.|||||||||||||||
RBAM_017180__ 851 TTCCGGATAAGTTCGTTGAGCTTGCACGTGAGGATAAAGCGGCTTATGTA 900
BSNT_02794___ 901 TTCTACCCGCACACGATTTATAAAGAGTACGGCCAGCACATGGATGAGAT 950
|||||.|||||.||||||||||||||.|||||||||||.|||||.||.||
RBAM_017180__ 901 TTCTATCCGCATACGATTTATAAAGAATACGGCCAGCATATGGACGAAAT 950
BSNT_02794___ 951 GGACATGAACGAAATGTACGACAAATTTGTCGACAACCCTCGGGTGAAAA 1000
||||||||..|..|||||.||..|..||||||||||||||||.||.||||
RBAM_017180__ 951 GGACATGACGGCGATGTATGAAGAGCTTGTCGACAACCCTCGTGTCAAAA 1000
BSNT_02794___ 1001 AGGAAAAAATCAACCCGCGGAAACTGCTTGAAAAACTGGCGATGCTTCGT 1050
|.||||||.|.||..||||.|||.||||||||||.||.||..|.||.|||
RBAM_017180__ 1001 AAGAAAAAGTGAATGCGCGCAAATTGCTTGAAAAGCTTGCCGTTCTCCGT 1050
BSNT_02794___ 1051 TCTGAATCAGGCTATCCATACATCATGTTCCAAGATAACGTCAATAAAGT 1100
|||||.|||||.|||||.|||||.||||||||.||.|||||.||.||||.
RBAM_017180__ 1051 TCTGAGTCAGGTTATCCGTACATTATGTTCCAGGACAACGTAAACAAAGA 1100
BSNT_02794___ 1101 GCATGCGAATAACCATATTTCCAAGGTCAAATTTTCTAACCTTTGCTCTG 1150
|||.|||||||||||..|.||.||.||.|||||.||.|||||||||||||
RBAM_017180__ 1101 GCACGCGAATAACCACGTATCAAAAGTGAAATTCTCGAACCTTTGCTCTG 1150
BSNT_02794___ 1151 AAGTGCTGCAGGCATCTCAAGTTTCTTCATACACAGACTATGATGAAGAA 1200
|||||||.|||||.||.||||||||..|.||||||||.||||||||||||
RBAM_017180__ 1151 AAGTGCTTCAGGCGTCACAAGTTTCGGCTTACACAGATTATGATGAAGAA 1200
BSNT_02794___ 1201 GATGAAATCGGTCTGGATATTTCCTGCAACCTGGGTTCGCTTAACATTCT 1250
||.||||||||..||||.||||||||||||||.|||||..|.||.|||.|
RBAM_017180__ 1201 GACGAAATCGGCTTGGACATTTCCTGCAACCTTGGTTCATTAAATATTTT 1250
BSNT_02794___ 1251 AAATGTCATGGAGCATAAATCAATCGAAAAGACAGTCAAGCTTGCGACAG 1300
.|||||||||.|.||||||||.||.||....||.||.||.||.|||||.|
RBAM_017180__ 1251 GAATGTCATGAAACATAAATCGATTGAGCGCACGGTGAAACTCGCGACGG 1300
BSNT_02794___ 1301 ACTCTTTAACACACGTGTCTGAAACAACTGACATCCGTAATGCGCCTGCT 1350
|.||..|.||.||.||.|||||.||.||.||.|||||.||.|||||.||.
RBAM_017180__ 1301 ATTCCCTGACTCATGTATCTGAGACGACGGATATCCGCAACGCGCCGGCA 1350
BSNT_02794___ 1351 GTAAGACGGGCAAACAAAGCGATGAAATCAATCGGCCTCGGTGCTATGAA 1400
||.|||||.||.||||||||||||||.||.|||||..|.||.||.|||||
RBAM_017180__ 1351 GTCAGACGCGCGAACAAAGCGATGAAGTCGATCGGTTTAGGCGCCATGAA 1400
BSNT_02794___ 1401 CCTTCACGGCTACCTTGCGCAAAACGGCATTGCGTATGAAAGTCCGGAAG 1450
|||||||||||||||.||.|||||||||||.|||||||||||.|||||||
RBAM_017180__ 1401 CCTTCACGGCTACCTGGCCCAAAACGGCATCGCGTATGAAAGCCCGGAAG 1450
BSNT_02794___ 1451 CGCGTGACTTTGCAAACACGTTCTTTATGATGGTGAACTTCTACTCCATC 1500
|..|.||.||.||.||.|||||||||||||||||||||||.||.||||||
RBAM_017180__ 1451 CAAGAGATTTCGCGAATACGTTCTTTATGATGGTGAACTTTTATTCCATC 1500
BSNT_02794___ 1501 CAGCGTTCTGCGGAAATCGCAAAAGAGAAGGGTGAAACGTTTGATCAATA 1550
||||||||.||.||..|.||.|||||.||.||.|||||||||||.||.||
RBAM_017180__ 1501 CAGCGTTCAGCTGAGCTTGCGAAAGAAAAAGGCGAAACGTTTGAGCATTA 1550
BSNT_02794___ 1551 TGAAGGCTCAACCTATGCGACAGGTGAATACTTTGACAAATACGTTTCTA 1600
|||||||||.||.|||||.||.||.|||||.||..|.||||||.|....|
RBAM_017180__ 1551 TGAAGGCTCCACTTATGCAACGGGAGAATATTTCAATAAATACATCGAAA 1600
BSNT_02794___ 1601 CTGATTTCTCACCGAAATATGAAAAAATAGCTAATCTGTTTGAAGGTATG 1650
..||.|||||||||..|||.||||||||.|||...||.||||||||.|||
RBAM_017180__ 1601 AAGAGTTCTCACCGGCATACGAAAAAATCGCTGCGCTCTTTGAAGGCATG 1650
BSNT_02794___ 1651 CATATCCCGACGACAGAGGACTGGAAAAAGCTAAAAGCATTTGTGGCTGA 1700
||.||.|||||.|..||.|||||||||.||.|.||.||.|||||.|||||
RBAM_017180__ 1651 CACATTCCGACAATCGAAGACTGGAAAGAGTTGAAGGCGTTTGTCGCTGA 1700
BSNT_02794___ 1701 ACACGGTATGTATCACAGCTACAGATTATGCATTGCGCCGACAGGCTCTA 1750
|.||||.|||||.||||||||||||.|.|||||.|||||||||||.||.|
RBAM_017180__ 1701 AAACGGCATGTACCACAGCTACAGACTGTGCATCGCGCCGACAGGTTCCA 1750
BSNT_02794___ 1751 TCTCATACGTTCAATCAAGTACGGCGTCTGTTATGCCGATTATGGAACGC 1800
|.||.|||||.|||||.||.||||||||.|||||||||||.||||||||.
RBAM_017180__ 1751 TTTCCTACGTCCAATCCAGCACGGCGTCCGTTATGCCGATCATGGAACGG 1800
BSNT_02794___ 1801 ATTGAAGAACGAACATACGGCAACTCAAAAACGTACTACCCAATGCCTGG 1850
||.||||||.||||||||||.||.|||||||||||.|||||.|||||.||
RBAM_017180__ 1801 ATCGAAGAAAGAACATACGGAAATTCAAAAACGTATTACCCGATGCCGGG 1850
BSNT_02794___ 1851 GCTTGCATCTAATAACTGGTTCTTCTATAAAGAAGCCTACGATATGGACA 1900
|.|.||.||||||||||||||||||||.||||||||.||.||||||||||
RBAM_017180__ 1851 GTTAGCGTCTAATAACTGGTTCTTCTACAAAGAAGCTTATGATATGGACA 1900
BSNT_02794___ 1901 TGTTCAAGGTTGTGGATATGATCGCCACTATCCAGCAGCACATTGATCAG 1950
|||||||.||.||||||||||||||.||.|||||||||||.||.||||||
RBAM_017180__ 1901 TGTTCAAAGTGGTGGATATGATCGCGACAATCCAGCAGCATATCGATCAG 1950
BSNT_02794___ 1951 GGAATCAGCTTTACATTGTTCTTAAAAGACACAATGACGACCCGTGATTT 2000
||||||||||||||..||||.||.|||||.||.|||||.||.||||||.|
RBAM_017180__ 1951 GGAATCAGCTTTACCCTGTTTTTGAAAGATACGATGACAACTCGTGATCT 2000
BSNT_02794___ 2001 AAACCGAATCGATCTGTATGCACATCATAGAGGTATTAAAACCATTTACT 2050
.|||||.||.|||||||||||.||.||||||||.||.|||||||||||||
RBAM_017180__ 2001 GAACCGTATTGATCTGTATGCCCACCATAGAGGCATCAAAACCATTTACT 2050
BSNT_02794___ 2051 ATGCAAGAACGAAAGATACTGGGCAAGATAGCTGCCTTTCTTGTGTTGTT 2100
|||||||||||||||||||.|||||.||.|||||.|||||||||||.|||
RBAM_017180__ 2051 ATGCAAGAACGAAAGATACCGGGCAGGACAGCTGTCTTTCTTGTGTCGTT 2100
BSNT_02794___ 2101 TGA 2103
|||
RBAM_017180__ 2101 TGA 2103
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