Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02898 and RBAM_017320

See Amino acid alignment / Visit BSNT_02898 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:46
# Commandline: needle
#    -asequence dna-align/BSNT_02898___xynP.1.9828.seq
#    -bsequence dna-align/RBAM_017320___xynP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02898___xynP-RBAM_017320___xynP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02898___xynP-RBAM_017320___xynP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02898___xynP
# 2: RBAM_017320___xynP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1392
# Identity:    1275/1392 (91.6%)
# Similarity:  1275/1392 (91.6%)
# Gaps:           0/1392 ( 0.0%)
# Score: 5907.0
# 
#
#=======================================

BSNT_02898___      1 ATGCTCAGTGAAAATGTAAAGAAGATTAGCATGGTTGAAAAAGTTGGATA     50
                     ||||||.|||||||||||||||||||.|||||||||||||||||||||||
RBAM_017320__      1 ATGCTCGGTGAAAATGTAAAGAAGATCAGCATGGTTGAAAAAGTTGGATA     50

BSNT_02898___     51 TGCGTCTGGAGATTTTGCTTGTAATTTAATTTATGCAACAGTGTCTACGT    100
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_017320__     51 TGCGTCTGGAGATTTTGCTTGTAATCTAATTTATGCAACAGTGTCTACGT    100

BSNT_02898___    101 ATCTTTTGTTCTTCTATACAGATGTTTTTGGTTTATCGGCAGCAGCAGCC    150
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
RBAM_017320__    101 ATCTTTTGTTCTTCTATACAGATGTATTTGGTTTATCGGCAGCAGCAGCC    150

BSNT_02898___    151 GGTACTATGTTTTTAGTGGTTAGAATAATCGACGCTCTCGCTGATCCTTT    200
                     |||||.||||||||||||||||||||.|||||||||||||||||||||||
RBAM_017320__    151 GGTACGATGTTTTTAGTGGTTAGAATCATCGACGCTCTCGCTGATCCTTT    200

BSNT_02898___    201 TATCGGAACAATAGTTGACAGAACGAACAGCAGATTTGGACGCTTTAGAC    250
                     ||||||||||||.|||||||||||.||.|||||.|||||.|||||.||||
RBAM_017320__    201 TATCGGAACAATCGTTGACAGAACAAATAGCAGGTTTGGCCGCTTCAGAC    250

BSNT_02898___    251 CGTATCTTTTATTCGGAGCTTTTCCATTTGTCATACTGGCAATACTCTGT    300
                     |||||||||||||||||||||||||.|||||||||.||||||||||||||
RBAM_017320__    251 CGTATCTTTTATTCGGAGCTTTTCCCTTTGTCATATTGGCAATACTCTGT    300

BSNT_02898___    301 TTTACAACACCAGACTTTTCGGATATGGGGAAATTAGTATATGCCTATAT    350
                     ||||||||.||.||.|||||||||||||||||||||.|||||||||||||
RBAM_017320__    301 TTTACAACCCCGGATTTTTCGGATATGGGGAAATTAATATATGCCTATAT    350

BSNT_02898___    351 AACCTATGTTGGCTTGTCGCTTACATACACAACGATAAACGTTCCATATG    400
                     .||||||||.|||.|.||||||||||||||.|.|||||||||.|||||||
RBAM_017320__    351 CACCTATGTCGGCCTATCGCTTACATACACCATGATAAACGTGCCATATG    400

BSNT_02898___    401 GCGCGTTAACTTCTGCAATGACTAGAAATAATCAAGAAGTTGTTAGTATA    450
                     ||||||||||.|||||||||||.|||||||||||||||||||||||||||
RBAM_017320__    401 GCGCGTTAACATCTGCAATGACCAGAAATAATCAAGAAGTTGTTAGTATA    450

BSNT_02898___    451 ACTTCTGTTCGCATGTTATTTGCGAATCTTGGGGGACTTGTCGTTGCATT    500
                     ||.|||||.||.||||||||||||||||||||.|||||||||||||||||
RBAM_017320__    451 ACGTCTGTCCGTATGTTATTTGCGAATCTTGGAGGACTTGTCGTTGCATT    500

BSNT_02898___    501 TTTTGTTCCCTTACTGGCTGCTTATTTAAGCGATACTTCCGGCAACGAGT    550
                     |||||||||.|||||||||||||||||||||||||.||||||||.|||.|
RBAM_017320__    501 TTTTGTTCCTTTACTGGCTGCTTATTTAAGCGATAATTCCGGCAGCGAAT    550

BSNT_02898___    551 CTCTTGGCTGGCAACTAACCATGGGTATTTTGGGAATGATAGGCGGGTGC    600
                     |||||||||||||.|||||||||||||||.|||||.|.||.|||||||||
RBAM_017320__    551 CTCTTGGCTGGCAGCTAACCATGGGTATTATGGGAGTTATTGGCGGGTGC    600

BSNT_02898___    601 CTTTTAATCTTTTGTTTTAAAAGCACAAAAGAGCGGGTCACTCTTCAAAA    650
                     |||||||||||||||||||||||||||||||||||.|||||.||||||||
RBAM_017320__    601 CTTTTAATCTTTTGTTTTAAAAGCACAAAAGAGCGTGTCACGCTTCAAAA    650

BSNT_02898___    651 ATCCGAAGAAAAAATTAAATTTACGGATATATTTGAGCAGTTTCGTGTTA    700
                     |||.||||||||||||||||||.||||||||||||||||.||||||||||
RBAM_017320__    651 ATCGGAAGAAAAAATTAAATTTTCGGATATATTTGAGCAATTTCGTGTTA    700

BSNT_02898___    701 ATCGTCCACTTGTTGTATTAAGTATTTTCTTTATTATTATTTTTGGAGTG    750
                     ||||.||.||.|||||||||||||||||||||||||||||||||||||||
RBAM_017320__    701 ATCGGCCTCTAGTTGTATTAAGTATTTTCTTTATTATTATTTTTGGAGTG    750

BSNT_02898___    751 AATTCCATCAGTAATTCGGTTGGCATTTATTACGTAACATATAACTTAGA    800
                     |||||.||||||||||||||||||||.|||||||||||.|||||.|||||
RBAM_017320__    751 AATTCAATCAGTAATTCGGTTGGCATCTATTACGTAACGTATAATTTAGA    800

BSNT_02898___    801 AAGAGAGGATTTGGTGAAGTGGTACGGTTTGATAGGAAGTTTGCCCGCTT    850
                     |||||.||||||.||||||||||||||||||.|.||.||||||||.||||
RBAM_017320__    801 AAGAGCGGATTTAGTGAAGTGGTACGGTTTGTTGGGGAGTTTGCCTGCTT    850

BSNT_02898___    851 TGGTCATTTTACCGTTTATTCCAAGGCTTCATCAATTTTTGGGGAAGAAG    900
                     ||||||||||||||||||||||||.||||||||||||.||.|||||||||
RBAM_017320__    851 TGGTCATTTTACCGTTTATTCCAAAGCTTCATCAATTATTAGGGAAGAAG    900

BSNT_02898___    901 AAATTACTAAACTATGCATTATTACTGAATATTATCGGCCTCTTAGCTTT    950
                     ||||||.|||||||||||||||||||||||||.|||||||||||||||||
RBAM_017320__    901 AAATTATTAAACTATGCATTATTACTGAATATGATCGGCCTCTTAGCTTT    950

BSNT_02898___    951 ACTGTTTGCTCCGCCAAGTAATGTATACCTCATACTTGTCTGTCGATTAA   1000
                     |||.||.|.||||.||||||||||||.|||.||||||..||.||||||..
RBAM_017320__    951 ACTTTTCGTTCCGTCAAGTAATGTATTCCTGATACTTTCCTTTCGATTGC   1000

BSNT_02898___   1001 TCGCTGCTGCTGGAAGTCTCACTGCCGGGGGATATATGTGGGCGCTTATT   1050
                     |.||.|||||.|||||||||||||||||||||||||||||||||||||||
RBAM_017320__   1001 TGGCCGCTGCAGGAAGTCTCACTGCCGGGGGATATATGTGGGCGCTTATT   1050

BSNT_02898___   1051 CCTGAAACAATTGAATATGGAGAGTACAGGACTGGGAAAAGAATGGGTGG   1100
                     |||||||||||.||||||||||||||.|.|||.||||||||||||||.||
RBAM_017320__   1051 CCTGAAACAATAGAATATGGAGAGTATAAGACCGGGAAAAGAATGGGCGG   1100

BSNT_02898___   1101 GCTCATTTACGCTATCATCGGATTTTTCTTTAAGTTTGGTATGGCCTTAG   1150
                     .|||||.||||||||.|||||||||||||||||.||.||.||||||||.|
RBAM_017320__   1101 TCTCATATACGCTATTATCGGATTTTTCTTTAAATTCGGCATGGCCTTGG   1150

BSNT_02898___   1151 GAGGAGTTGTTCCGGGTCTGGTTCTTGATAAGTTTGGATATGTAGCAAAT   1200
                     ||||.|||||.||||||.|||||||.|||.|||||||||||||.||||||
RBAM_017320__   1151 GAGGGGTTGTACCGGGTTTGGTTCTAGATCAGTTTGGATATGTGGCAAAT   1200

BSNT_02898___   1201 CAGGCACAAACCCCGGCGGCATTAATGGGGATTTTAATTACAACAACGAT   1250
                     ||||..|||||.||||.||||||.|.|||.|||||||||||||||||.||
RBAM_017320__   1201 CAGGTGCAAACGCCGGAGGCATTGACGGGAATTTTAATTACAACAACCAT   1250

BSNT_02898___   1251 TATTCCCGTGTTCTTGCTTGTTCTAGCTTTAATTGATATTAATTTCTATA   1300
                     |||||||||||||||.||.|||||.||..|.|||||||||||||||||||
RBAM_017320__   1251 TATTCCCGTGTTCTTACTGGTTCTGGCCATGATTGATATTAATTTCTATA   1300

BSNT_02898___   1301 ACTTAGATGAGAAAAAATATAAAAACATGGTTCGAGAATTAGAGAATAGA   1350
                     |||||||||||||||||||.||||.|||||||||||||||||||||||||
RBAM_017320__   1301 ACTTAGATGAGAAAAAATACAAAAGCATGGTTCGAGAATTAGAGAATAGA   1350

BSNT_02898___   1351 GACAAAGTTTATTTGGATCATATTGATGATTTCACTATTTAG   1392
                     ||||||||||||||||||||||||||.|||||||....|||.
RBAM_017320__   1351 GACAAAGTTTATTTGGATCATATTGACGATTTCAAAGCTTAA   1392


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