Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02906 and RBAM_017360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:47
# Commandline: needle
# -asequence dna-align/BSNT_02906___xylB.1.9828.seq
# -bsequence dna-align/RBAM_017360___xylB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02906___xylB-RBAM_017360___xylB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02906___xylB-RBAM_017360___xylB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02906___xylB
# 2: RBAM_017360___xylB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1500
# Identity: 1350/1500 (90.0%)
# Similarity: 1350/1500 (90.0%)
# Gaps: 0/1500 ( 0.0%)
# Score: 6150.0
#
#
#=======================================
BSNT_02906___ 1 ATGAAGTATGTCATTGGAATAGATCTTGGAACGAGTGCTGTTAAAACCAT 50
|||||||||||||||||||||||||||||.||||||||.|||||||||||
RBAM_017360__ 1 ATGAAGTATGTCATTGGAATAGATCTTGGTACGAGTGCCGTTAAAACCAT 50
BSNT_02906___ 51 TTTAGTTAACCAAAACGGCAAGGTTTGTGCAGAAACGTCCAAAAGGTATC 100
||||||.||.|||||.||||||||||||||||||||||.||||||.||.|
RBAM_017360__ 51 TTTAGTCAATCAAAATGGCAAGGTTTGTGCAGAAACGTTCAAAAGTTACC 100
BSNT_02906___ 101 CGCTTATCCAAGAGAAGGCGGGATATAGTGAGCAAAATCCTGAAGACTGG 150
||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_017360__ 101 CGCTCATCCAAGAGAAGGCGGGATATAGTGAGCAAAATCCTGAAGACTGG 150
BSNT_02906___ 151 GTGCAGCAAACAATTGAAGCATTGGCTGAATTGGTTTCTATATCCAATGT 200
||||||||||||||||.||||||||||||||||.||||.||||||||.||
RBAM_017360__ 151 GTGCAGCAAACAATTGCAGCATTGGCTGAATTGATTTCGATATCCAACGT 200
BSNT_02906___ 201 TCAAGCCAAGGATATTGACGGGATAAGCTATTCGGGACAAATGCATGGAT 250
||||.||..|||||||||||||||.||||||||.||||||||||||||.|
RBAM_017360__ 201 TCAACCCGGGGATATTGACGGGATTAGCTATTCAGGACAAATGCATGGGT 250
BSNT_02906___ 251 TAGTACTGCTTGATAAAGATTGTCAGGTGTTACGTAATGCAATTCTTTGG 300
||||.|||||||||.|||||..|||||||.|.|||.||||.|||||||||
RBAM_017360__ 251 TAGTGCTGCTTGATCAAGATCTTCAGGTGCTGCGTCATGCGATTCTTTGG 300
BSNT_02906___ 301 AATGATACCAGAACAACGCCTCAATGTATAAGGATGACCGAGAAATTTGG 350
||||||||||||||.|||||||||||||..|||||.|||||||.||||||
RBAM_017360__ 301 AATGATACCAGAACGACGCCTCAATGTAGCAGGATAACCGAGACATTTGG 350
BSNT_02906___ 351 CGATCATCTTCTTGACATCACAAAAAACCGTGTTTTAGAAGGGTTTACAT 400
|||||.|||.|||||.|||||||||||||||||..|.|||||||||||||
RBAM_017360__ 351 CGATCGTCTGCTTGATATCACAAAAAACCGTGTCCTTGAAGGGTTTACAT 400
BSNT_02906___ 401 TACCTAAAATGTTATGGGTGAAGGAACATGAACCTGAACTTTTTAAAAAA 450
|||||||||||||||||||||||||||||||.||||||||||||.|.|||
RBAM_017360__ 401 TACCTAAAATGTTATGGGTGAAGGAACATGAGCCTGAACTTTTTCACAAA 450
BSNT_02906___ 451 ACTGCTGTGTTTTTGCTTCCGAAAGACTATGTGAGATTCCGTATGACCGG 500
||.|||||.||||||||||||||||||||||||||||||||.|||||.||
RBAM_017360__ 451 ACCGCTGTTTTTTTGCTTCCGAAAGACTATGTGAGATTCCGCATGACTGG 500
BSNT_02906___ 501 TGCCATTCACACGGAATACTCCGATGCAGCAGGAACTTTACTTTTACATA 550
.|||||||||||.||||||||||||||.||||||||.|||||||||||||
RBAM_017360__ 501 CGCCATTCACACTGAATACTCCGATGCGGCAGGAACGTTACTTTTACATA 550
BSNT_02906___ 551 TTACTCGCAAGGAGTGGAGCAATGATATTTGCAATCAAATTGGTATTTCT 600
|.||.|||||.|||||||||.||||.||||||||||||.|||||||.||.
RBAM_017360__ 551 TGACCCGCAAAGAGTGGAGCGATGAGATTTGCAATCAATTTGGTATGTCA 600
BSNT_02906___ 601 GCAGATATTTGTCCTCCGCTTGTTGAATCTCATGATTGTGTAGGGTCGCT 650
||.||..||||||||||||||||||||||.|||||.||||||||.|||||
RBAM_017360__ 601 GCGGAAGTTTGTCCTCCGCTTGTTGAATCCCATGACTGTGTAGGATCGCT 650
BSNT_02906___ 651 GCTTCCGCACGTTGCCGCCAAGACCGGACTATTAGAAAAAACAAAAGTGT 700
|||||||..||||||.||..||||.||.||.||.||||||||||||||||
RBAM_017360__ 651 GCTTCCGAGCGTTGCGGCGGAGACTGGGCTGTTGGAAAAAACAAAAGTGT 700
BSNT_02906___ 701 ACGCTGGGGGAGCAGATAATGCTTGCGGCGCTATTGGAGCAGGTATCCTT 750
||||.|||||||||||||||||||||||.|||.|.|||||.|||||.|||
RBAM_017360__ 701 ACGCCGGGGGAGCAGATAATGCTTGCGGTGCTGTCGGAGCCGGTATTCTT 750
BSNT_02906___ 751 TCTTCCGGAAAAACTTTATGCAGTATTGGGACCTCAGGGGTCATACTTTC 800
||||||||||||||.|||||||||||.|||||.|||||.|||||||||||
RBAM_017360__ 751 TCTTCCGGAAAAACATTATGCAGTATCGGGACGTCAGGAGTCATACTTTC 800
BSNT_02906___ 801 CTACGAAGAAGAAAAAGAAAGAGACTTTAAAGGCAAAGTCCACTTTTTTA 850
||..||||||||.||||||||.|||||||||||.|||||.||||||||||
RBAM_017360__ 801 CTGTGAAGAAGACAAAGAAAGGGACTTTAAAGGGAAAGTGCACTTTTTTA 850
BSNT_02906___ 851 ATCATGGAAAAAAGGATTCTTTTTATACGATGGGCGTCACGCTCGCTGCA 900
||||||||||.|||||||||||||||||||||||.|||||||||||||||
RBAM_017360__ 851 ATCATGGAAAGAAGGATTCTTTTTATACGATGGGAGTCACGCTCGCTGCA 900
BSNT_02906___ 901 GGATACAGCTTGGACTGGTTTAAAAGAACGTTTGCACCAAACGAATCGTT 950
||.||||||||||||||||||||||||||||||||.||.|||||||||||
RBAM_017360__ 901 GGGTACAGCTTGGACTGGTTTAAAAGAACGTTTGCGCCGAACGAATCGTT 950
BSNT_02906___ 951 TGAGCAATTATTGCAGGGGGTGGAAGCTATTCCGATAGGAGCCAATGGAC 1000
|||.||||||||.|.||||||||||.||.|||||||||||||.|||||||
RBAM_017360__ 951 TGAACAATTATTACGGGGGGTGGAATCTGTTCCGATAGGAGCAAATGGAC 1000
BSNT_02906___ 1001 TGCTATACACTCCTTATTTGGTTGGTGAAAGAACGCCGCATGCTGATTCT 1050
||||.|||||||||||.||.||.||||||||||||||||||||||||||.
RBAM_017360__ 1001 TGCTGTACACTCCTTACTTAGTCGGTGAAAGAACGCCGCATGCTGATTCA 1050
BSNT_02906___ 1051 TCTATTCGGGGAAGCTTGATCGGAATGGATGGAGCCCACAATAGAAAGCA 1100
|||||||||||||||||||||||||||||.||||||||.||.|||.||||
RBAM_017360__ 1051 TCTATTCGGGGAAGCTTGATCGGAATGGACGGAGCCCATAAAAGAGAGCA 1100
BSNT_02906___ 1101 CTTTTTGAGGGCAATAATGGAAGGTATCACATTCTCTTTACATGAATCAA 1150
||||||||||||.|||||||||||.|||||||||||||||.|||||||||
RBAM_017360__ 1101 CTTTTTGAGGGCGATAATGGAAGGCATCACATTCTCTTTATATGAATCAA 1150
BSNT_02906___ 1151 TTGAGCTATTCCGCGAAGCGGGAAAATCAGTTCATACTGTTGTTTCTATT 1200
||||||||||||||||||||||||||||||||.||||.|||||.||||||
RBAM_017360__ 1151 TTGAGCTATTCCGCGAAGCGGGAAAATCAGTTGATACGGTTGTCTCTATT 1200
BSNT_02906___ 1201 GGTGGGGGAGCTAAAAATGATACGTGGCTGCAAATGCAAGCTGATATTTT 1250
||.|||||||||||||||||.||||||||.||||||||.|||||||||||
RBAM_017360__ 1201 GGCGGGGGAGCTAAAAATGAAACGTGGCTTCAAATGCAGGCTGATATTTT 1250
BSNT_02906___ 1251 CAATACGAGGGTAATTAAGTTAGAAAATGAACAAGGGCCAGCTATGGGGG 1300
||||||||||||..||||||||||.|||||||||||.||.||.|||||||
RBAM_017360__ 1251 CAATACGAGGGTTGTTAAGTTAGAGAATGAACAAGGTCCCGCCATGGGGG 1300
BSNT_02906___ 1301 CTGCAATGCTGGCTGCCTTTGGAAGCGGATGGTTTGAATCCCTTGAAGAA 1350
||||.|||.|.||||||||.||||||||.||||||||.||.|||||||||
RBAM_017360__ 1301 CTGCGATGTTAGCTGCCTTCGGAAGCGGGTGGTTTGACTCTCTTGAAGAA 1350
BSNT_02906___ 1351 TGTGCAGAGCAGTTCATTCGTGAGGCTGCTGCATTTTATCCAAAGGCGCA 1400
|||||||||||||||||||.|||.||.|||||||||||||||||.|..||
RBAM_017360__ 1351 TGTGCAGAGCAGTTCATTCATGAAGCAGCTGCATTTTATCCAAAAGAACA 1400
BSNT_02906___ 1401 AAATGTTCAAAAATATAAAACACTATTTGATTTGTATAAGAACATTTATA 1450
|||||||||||||||||||||||||||.||.|||||||||||||||||..
RBAM_017360__ 1401 AAATGTTCAAAAATATAAAACACTATTCGAGTTGTATAAGAACATTTACG 1450
BSNT_02906___ 1451 CTCACACAAAGGATCTCAATCAAGCTTTGAAGAGCTTTCGAAAAAACTAA 1500
.|||||||||.|||||||||..||||||.|||||||||.||.||||.|.|
RBAM_017360__ 1451 TTCACACAAAAGATCTCAATACAGCTTTAAAGAGCTTTAGACAAAAATGA 1500
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