Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02967 and RBAM_017730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:49
# Commandline: needle
# -asequence dna-align/BSNT_02967___ccdA.1.9828.seq
# -bsequence dna-align/RBAM_017730___ccdA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02967___ccdA-RBAM_017730___ccdA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02967___ccdA-RBAM_017730___ccdA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02967___ccdA
# 2: RBAM_017730___ccdA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 741
# Identity: 507/741 (68.4%)
# Similarity: 507/741 (68.4%)
# Gaps: 69/741 ( 9.3%)
# Score: 1702.5
#
#
#=======================================
BSNT_02967___ 1 ATGGGAGACGTG------AATTATTTTTTGACATTCGGAGCGGGGTTTTT 44
||| |||||.|||.||||.||.||.||.||.|||.|
RBAM_017730__ 1 ---------GTGAGTTTTAATTACTTTCTGACGTTTGGGGCCGGATTTCT 41
BSNT_02967___ 45 ATCCTTTATTTCGCCTTGCTGCCTGCCGCTTTACCCAGCTTTTTTGTCAT 94
.||.||.|||||.||.|||||.||||||.|.|||||.||.|||||.||.|
RBAM_017730__ 42 GTCTTTCATTTCTCCATGCTGTCTGCCGTTGTACCCCGCCTTTTTATCTT 91
BSNT_02967___ 95 ATATTACAGGGGTCAGCATGGACGATGTAAAAACTGAAAAGCTGCTGCTG 144
|.||.||.||.|||||.||||||||.||.|||||.||||||.||.|||||
RBAM_017730__ 92 ACATAACTGGTGTCAGTATGGACGAGGTGAAAACAGAAAAGGTGATGCTG 141
BSNT_02967___ 145 CAGAAAAGAAGCTTGTTTCATACTTTGTGTTTTTTGCTTGGCTTTTCAGT 194
||.||..|..||.|..|.|||||..|.||||||||||||||.||.||.||
RBAM_017730__ 142 CAAAAGCGCGGCCTCGTGCATACACTTTGTTTTTTGCTTGGTTTCTCCGT 191
BSNT_02967___ 195 CATTTTTATTGCTTTAGGCTATGGAACATCTTTTATTGGCAGCCTGTTTA 244
.||||||||.||.||.||.||||||||.||.|||||.|||||..|.||||
RBAM_017730__ 192 GATTTTTATCGCATTGGGATATGGAACTTCGTTTATCGGCAGTTTTTTTA 241
BSNT_02967___ 245 GGGATTATCACGATGCGATTCGGCAAATTGGCGCGT----TGCTTATTAT 290
...|.|||||.||.|||||.||.||..||||||| | ||||.||..|
RBAM_017730__ 242 CCCAATATCATGAAGCGATCCGCCAGTTTGGCGC-TATCATGCTGATCCT 290
BSNT_02967___ 291 TTTGTTCGGTTTCATTACACTCGGTGTGTTCCGGCCTGAGGCT-ATGATG 339
| |||||..|..||||...|||||||||.|.||| ||...| ||||||
RBAM_017730__ 291 T---TTCGGGCTGGTTACTGCCGGTGTGTTTCAGCC-GAAATTCATGATG 336
BSNT_02967___ 340 AAAGAGCGGAGAATCCATTTTAAGCATAAACCAAGC---------GGGTT 380
|||||||||.|.||.||.||||||| || |||||
RBAM_017730__ 337 AAAGAGCGGCGCATTCACTTTAAGC---------GCCGTCCGGAGGGGTT 377
BSNT_02967___ 381 TTTAGGGTCGGTCTTAATCGGAATGGCATTTGCAGCTGGATGGACACCAT 430
|.|.||.|||||..|.|||||..|.||.||||||||.||.|||.|.||.|
RBAM_017730__ 378 TATCGGTTCGGTTCTGATCGGTCTTGCGTTTGCAGCCGGCTGGTCGCCGT 427
BSNT_02967___ 431 GTACCGGTCCGATATTAGCTGC--TGTTATCACACTTGCAGGC----ACC 474
|.|.|||.||.||.||||..|| ||||.|| ||.||| ||.
RBAM_017730__ 428 GCAGCGGGCCCATTTTAGGAGCCGTGTTTTC------GCTGGCCAATACA 471
BSNT_02967___ 475 AATCCGGGCTCAGCGGTGCCATACATGATGTTATATGTACTCGGTTTTGC 524
|||||....|||||.|||||.||.|||.|.||||||||.|||||.|||||
RBAM_017730__ 472 AATCCTTCTTCAGCAGTGCCGTATATGTTTTTATATGTTCTCGGATTTGC 521
BSNT_02967___ 525 GGTACCGTTTCTT-TTATTGTCTTTTTTTATCACAAAGCTGAAGTGGATA 573
|.|.||.|||||| ||.|| ||.||||||||.||.|...||||.|||||.
RBAM_017730__ 522 GATTCCTTTTCTTGTTCTT-TCATTTTTTATTACCAGAATGAATTGGATT 570
BSNT_02967___ 574 AGGAAGAACCAGCTTTTCATTATGAAAGCTGGTGGCGTTTTGATGATTGT 623
.|.|||.|.|||||..|.||.||||||...||.|||.||.|.||||||.|
RBAM_017730__ 571 CGCAAGCATCAGCTGCTTATCATGAAAATCGGCGGCATTCTTATGATTCT 620
BSNT_02967___ 624 GATTGGTGTGCTGTTATTCTTTAATTGGATGAGC------CTGATCATTA 667
|||.||.||..||.|.||.|||||.||||||||| ||||||.||
RBAM_017730__ 621 GATCGGAGTTATGCTGTTTTTTAACTGGATGAGCTACATTCTGATCGTT- 669
BSNT_02967___ 668 TTTTGCTGTCAGATCTTTTTGGAGGCTTTACTGGTTTTTGA 708
||||||.|||||||.|||||.|||||.|||.|.|.|
RBAM_017730__ 670 -----CTGTCAAATCTTTTCGGAGGATTTACGGGTCTGTAA 705
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