Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02969 and RBAM_017750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:49
# Commandline: needle
# -asequence dna-align/BSNT_02969___yneJ.1.9828.seq
# -bsequence dna-align/RBAM_017750___ccdC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02969___yneJ-RBAM_017750___ccdC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02969___yneJ-RBAM_017750___ccdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02969___yneJ
# 2: RBAM_017750___ccdC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 384/490 (78.4%)
# Similarity: 384/490 (78.4%)
# Gaps: 14/490 ( 2.9%)
# Score: 1488.0
#
#
#=======================================
BSNT_02969___ 1 ATGATGATTATAGTTTCATCGATTATTGCTGTGTTAATGGCTGTAGCTGT 50
||||||||||||.|||||||..|||||||.|.|...|||||..|..|.||
RBAM_017750__ 1 ATGATGATTATAATTTCATCCGTTATTGCAGCGGCCATGGCAATTTCCGT 50
BSNT_02969___ 51 GATGGTGGTCAGAATAAAGTCCTCTGACAAGCCTGTTTCACCAAAAAAAA 100
||||.|.|||||.||.||.|||||.||||||||.|.||||||.|||||||
RBAM_017750__ 51 GATGATCGTCAGGATTAAATCCTCCGACAAGCCCGCTTCACCTAAAAAAA 100
BSNT_02969___ 101 TCATTCTTCCGCCGATTTTTATGAGTACGGGAGCGTTAATGTTTTTATTT 150
|.|||||.|||||||||||.|||||||||||||||.|.|||||..|.|||
RBAM_017750__ 101 TAATTCTCCCGCCGATTTTCATGAGTACGGGAGCGCTTATGTTCCTTTTT 150
BSNT_02969___ 151 CCGGTATTTT--GGGTAACTGGAGCAGAGTTTTTGGAAG-CATTCACTTT 197
||| ||||| |.||.||.||.|.|||.||||||||.| |||| ||..|
RBAM_017750__ 151 CCG--ATTTTCAGAGTGACGGGCGAAGAATTTTTGGAGGCCATT-ACGCT 197
BSNT_02969___ 198 AGGTGTGATTTTCTCTATTTTTCTAATCAAAACTTCTAAGTTCGAAATTA 247
.||.|||||.||||||||||||||.||.|||||.|||||.||.||.||||
RBAM_017750__ 198 GGGCGTGATCTTCTCTATTTTTCTGATTAAAACATCTAAATTTGAGATTA 247
BSNT_02969___ 248 AAAATAATGAAATTTACATGAAACGCTCTAAAGCATTTGTTTTTAT---- 293
|||||||||||||.||..|.|||||.||.|||||.|||||.|||||
RBAM_017750__ 248 AAAATAATGAAATCTATTTAAAACGGTCAAAAGCGTTTGTGTTTATCCTG 297
BSNT_02969___ 294 ATTAGTCGGTCTTTTGGTGATCAGAATCGTGATGAAATCGATCTTGAGCA 343
||| |||||.|||||.||||||||||..||||||||.||.|||||||
RBAM_017750__ 298 ATT----GGTCTCTTGGTTATCAGAATCGCTATGAAATCCATTTTGAGCA 343
BSNT_02969___ 344 CATCAATTGATTATGGTGCACTGAGCGGAATGTTTTGGATTCTGGCTTTC 393
|..|.||||||||.||.||..|.|||||||||||||||||||||||||||
RBAM_017750__ 344 CGACGATTGATTACGGAGCTTTAAGCGGAATGTTTTGGATTCTGGCTTTC 393
BSNT_02969___ 394 GGTATGATTGTGCCTTGGAGAATCGCCATGTATTTATCATATCGAAAACT 443
||.||||||||.||.|||.|.|||||.||||.|||.||.||.||.|||||
RBAM_017750__ 394 GGAATGATTGTCCCGTGGCGCATCGCGATGTTTTTGTCTTACCGCAAACT 443
BSNT_02969___ 444 TCATAACGAGCTGCAGTCATCTAATATTCAAATGAATTAA 483
|...||.||.|||.||.|..||.|||||||.|||||||||
RBAM_017750__ 444 TTCGAATGAACTGAAGACCGCTGATATTCAGATGAATTAA 483
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