Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02972 and RBAM_017770
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:49
# Commandline: needle
# -asequence dna-align/BSNT_02972___cotM.1.9828.seq
# -bsequence dna-align/RBAM_017770___cotM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02972___cotM-RBAM_017770___cotM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02972___cotM-RBAM_017770___cotM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02972___cotM
# 2: RBAM_017770___cotM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 391
# Identity: 267/391 (68.3%)
# Similarity: 267/391 (68.3%)
# Gaps: 35/391 ( 9.0%)
# Score: 828.5
#
#
#=======================================
BSNT_02972___ 1 ATGAACCATTCAAAACGCAACGATGCGAATGATTTCGATAGTATGGATGA 50
|||||.||.|||||| ||||.|| |.||.||.|||..||.|||.||
RBAM_017770__ 1 ATGAATCACTCAAAA---AACGCTG---AAGAATTTGATGATACGGAAGA 44
BSNT_02972___ 51 ATGGCTTCGGCAATTTTTTGAAGACCCCTTCGCCTGGTACGACGAAACAT 100
||||||.|||||.||||..||.|||||.|..||.|||||.|||||.||..
RBAM_017770__ 45 ATGGCTGCGGCAGTTTTACGAGGACCCGTATGCTTGGTATGACGAGACGC 94
BSNT_02972___ 101 TGCCTATTGATTTATATGAAACAAGTCAG-CAGTATATTATAGAAGCGGA 149
||||.||.|||.||||||||||||| ||| ||.|||||.||.|||||.||
RBAM_017770__ 95 TGCCGATCGATCTATATGAAACAAG-CAGTCAATATATCATTGAAGCCGA 143
BSNT_02972___ 150 TCTGACTTTTTTACAGCCTACA----CAAG---TAACAGTTACCCTTTCT 192
.|||||..|..|..|| || |||| ||||.||.||.|||||.
RBAM_017770__ 144 CCTGACGATGCTGAAG----CAGGTGCAAGCGATAACCGTCACTCTTTCG 189
BSNT_02972___ 193 GG--ATGCGAGTTCATCTTAACTGTCAAATCGTCAGGACAGACTTTTGAA 240
|| || ||.||.||..|..||||.|||.||...|.||.|||.||..|.
RBAM_017770__ 190 GGGAAT--GAATTTATGCTCTCTGTTAAAACGCTTGAACGGACGTTAAAC 237
BSNT_02972___ 241 AAACAAATGATGCTTCCTTTTTATTTTAATGACAAAAACA--TTCAAGCC 288
|||||||||.||||||||||||||.|.|||||||||.|.| |||| |.
RBAM_017770__ 238 AAACAAATGGTGCTTCCTTTTTATCTGAATGACAAACATATTTTCA--CT 285
BSNT_02972___ 289 GAATGCGAAAATCAAATACTCACAGTCGCCGTCAATAAAGAAACAGAAGA 338
||.|.|...||.||.||.||.||.|||.||.|.||.||.||..||.|.||
RBAM_017770__ 286 GATTTCACCAACCATATTCTGACCGTCTCCATGAACAAGGAGCCAAATGA 335
BSNT_02972___ 339 TGGCT----CTTCTTTTTCTCTTCAATTTCCTCTCAGCTAA 375
|.|| |.||.|||||..||||||||||||| .|||
RBAM_017770__ 336 -GACTCCTGCCTCATTTTCCTTTCAATTTCCTCT---ATAA 372
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