Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02981 and RBAM_017830

See Amino acid alignment / Visit BSNT_02981 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence dna-align/BSNT_02981___sspN.1.9828.seq
#    -bsequence dna-align/RBAM_017830___sspN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02981___sspN-RBAM_017830___sspN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02981___sspN-RBAM_017830___sspN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02981___sspN
# 2: RBAM_017830___sspN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     117/150 (78.0%)
# Similarity:   117/150 (78.0%)
# Gaps:           6/150 ( 4.0%)
# Score: 455.0
# 
#
#=======================================

BSNT_02981___      1 ATGGGAAACAACAAGAAAAACGGTCAGCCTCAATATGCTCCAAGCCACTT     50
                     |||||.|..|||||||||.||||.|||||.|||||.|||||.||||||||
RBAM_017830__      1 ATGGGCATAAACAAGAAAGACGGCCAGCCGCAATACGCTCCGAGCCACTT     50

BSNT_02981___     51 GGGTACAAAGCCTGTAAAATATAAAGCCAATAAAGGGGAAAAAATGCATG    100
                     .||.|||||.||.||.|||||||||..|||.|||||||||||..|.||||
RBAM_017830__     51 AGGGACAAAACCCGTTAAATATAAACGCAACAAAGGGGAAAAGTTTCATG    100

BSNT_02981___    101 ATACTTCA---GGACAGCGGCCGATTATCATGCAGACAAAAGGCGAGTAG    147
                     |.|..|||   |||||   .||||||.||||||||||.||||||||.||.
RBAM_017830__    101 ACAAGTCAAACGGACA---TCCGATTGTCATGCAGACGAAAGGCGAATAA    147


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