Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02984 and RBAM_017850

See Amino acid alignment / Visit BSNT_02984 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence dna-align/BSNT_02984.1.9828.seq
#    -bsequence dna-align/RBAM_017850___yneP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02984-RBAM_017850___yneP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02984-RBAM_017850___yneP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02984
# 2: RBAM_017850___yneP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 420
# Identity:     342/420 (81.4%)
# Similarity:   342/420 (81.4%)
# Gaps:           6/420 ( 1.4%)
# Score: 1371.5
# 
#
#=======================================

BSNT_02984         1 TTGCATGTATCAAAAAAAGAAATAGAAGTGCGTTATGCAGAAACAGATCA     50
                     ||||||||.|||||||||||||||||||||||||||||.|||||||||||
RBAM_017850__      1 TTGCATGTGTCAAAAAAAGAAATAGAAGTGCGTTATGCGGAAACAGATCA     50

BSNT_02984        51 AATGGGGATTGTCTATCACGCAAATTATCTT-GTGTGGATGGAGGTCGGC     99
                     ||||||.||.||||||||.||.||||| ||| ||.|||||||||||||||
RBAM_017850__     51 AATGGGCATCGTCTATCATGCCAATTA-CTTAGTCTGGATGGAGGTCGGC     99

BSNT_02984       100 AGAACGGCCTTGATTAAGGACTTAGGCTT--TTTATATAGTGATATGGAA    147
                     ||||||||..||||||||||..|.||.||  ||||.| || |||||||||
RBAM_017850__    100 AGAACGGCGCTGATTAAGGAACTCGGATTCCTTTACA-AG-GATATGGAA    147

BSNT_02984       148 AAAAAAGGCATTCTGTCCCCAGTCGTTGATATCAATATTTCCTATAAAAA    197
                     .|.|.|||..|.||||||||.||..|.|||||||..|||||.||||||||
RBAM_017850__    148 GATAGAGGAGTGCTGTCCCCTGTATTGGATATCAGCATTTCTTATAAAAA    197

BSNT_02984       198 GCCGCTTCATTACGGAGAAACCGCGGTTGTACATACATGGATAGAGGAAT    247
                     |||.||.|..|||||||||||.||.||.||||||||.|||||.||.||||
RBAM_017850__    198 GCCACTCCGCTACGGAGAAACGGCTGTCGTACATACTTGGATTGAAGAAT    247

BSNT_02984       248 ATAACGGCTTTAAAACCGTCTATGGTTATCACATTTATAATCCGGCCGGT    297
                     .||||||.|||||||||||.||.||.||.|||||.||||||||||.....
RBAM_017850__    248 CTAACGGATTTAAAACCGTTTACGGCTACCACATCTATAATCCGGATCAA    297

BSNT_02984       298 GAGCTTTCCATCAAAGCCACCTCATCTCATATTTGTGTGGATAAAGAAAG    347
                     ||.|||.||||||||||.||.||.||||||||.||.||.||||||||.||
RBAM_017850__    298 GAACTTGCCATCAAAGCGACATCCTCTCATATATGCGTTGATAAAGAGAG    347

BSNT_02984       348 CTTTAAGCCAATTCAATTCCGCAAAGCTTTTCCTGATTGGCACACATCAT    397
                     |||.||.||.|||||.||.|||||.|||||||||||||||||..|..|.|
RBAM_017850__    348 CTTCAAACCGATTCAGTTTCGCAAGGCTTTTCCTGATTGGCATGCCGCTT    397

BSNT_02984       398 ATGAAAAGGCCAAAAAATAG    417
                     |.||||||||.||||||||.
RBAM_017850__    398 ACGAAAAGGCAAAAAAATAA    417


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