Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03008 and RBAM_018300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:52
# Commandline: needle
# -asequence dna-align/BSNT_03008___yngA.1.9828.seq
# -bsequence dna-align/RBAM_018300___yngA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03008___yngA-RBAM_018300___yngA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03008___yngA-RBAM_018300___yngA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03008___yngA
# 2: RBAM_018300___yngA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 447
# Identity: 371/447 (83.0%)
# Similarity: 371/447 (83.0%)
# Gaps: 39/447 ( 8.7%)
# Score: 1707.0
#
#
#=======================================
BSNT_03008___ 1 ATGACTGCCACTCGCATCTTTTATGAAGGGAGGTCCGTTACGCTGAAAGA 50
|.|||||||||
RBAM_018300__ 1 ---------------------------------------ATGCTGAAAGA 11
BSNT_03008___ 51 AAAAATAAAGACCTTAGGCCGTTTTTGCACCGTAGGCGTCGGCAATACGC 100
||||.|||||||...|||||||||||||||.|||||||||||||||||||
RBAM_018300__ 12 AAAAGTAAAGACAGCAGGCCGTTTTTGCACTGTAGGCGTCGGCAATACGC 61
BSNT_03008___ 101 TGATAGATTTTGGTGTCTTCTTTCTTCTTACCGCTTGTCATGTCTCTTAT 150
||||.|||||||||||||||||||||||..||||||||||||||.|.|||
RBAM_018300__ 62 TGATCGATTTTGGTGTCTTCTTTCTTCTCGCCGCTTGTCATGTCCCCTAT 111
BSNT_03008___ 151 CTGCCGGCGCAGATCTGCTCCTATACTGCAGGTATCGTCAACAGCTATGT 200
||.|||||||||||||||||||||.|.|||||.|||.|||||||||||||
RBAM_018300__ 112 CTTCCGGCGCAGATCTGCTCCTATTCGGCAGGGATCATCAACAGCTATGT 161
BSNT_03008___ 201 GTGGAACCGGAATTGGACGTTTTGTGTGAAACGTAAGGCTGACGGGAAAG 250
.|||||||||||.|||||||||.||||.|||||.||||||||||||||||
RBAM_018300__ 162 ATGGAACCGGAAGTGGACGTTTCGTGTAAAACGCAAGGCTGACGGGAAAG 211
BSNT_03008___ 251 AGATCGTGCGTTTTCTCATGATTAATATTGCCGCGTCGGGGATCACCTTT 300
|||||.||||.|||.|||||||||||.|||||||||||||.|||||||||
RBAM_018300__ 212 AGATCATGCGATTTGTCATGATTAATCTTGCCGCGTCGGGAATCACCTTT 261
BSNT_03008___ 301 TTGCTGCTTTATTTGTTTCAAAATTGCGGCTGCTCGCTTTTGGTGAGTAA 350
|||||||||||...|||||||||..|||||||.|||||.|||||||||||
RBAM_018300__ 262 TTGCTGCTTTACGCGTTTCAAAAAGGCGGCTGTTCGCTATTGGTGAGTAA 311
BSNT_03008___ 351 GCTCGCCGCCACTATCGGCGGAATGATGATGAATTTTATCGGAAACCGAA 400
|.|||||||||||||||||||.||||||||||||||||||||||||||||
RBAM_018300__ 312 GTTCGCCGCCACTATCGGCGGGATGATGATGAATTTTATCGGAAACCGAA 361
BSNT_03008___ 401 TCTGGGTATTTGGGGATTCACTGAAAAACATACAGGATCAGGAGTGA 447
|||||||||||||.|||||.|||||||||||||||||||||||||||
RBAM_018300__ 362 TCTGGGTATTTGGAGATTCGCTGAAAAACATACAGGATCAGGAGTGA 408
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