Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03017 and RBAM_018360
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:53
# Commandline: needle
# -asequence dna-align/BSNT_03017.1.9828.seq
# -bsequence dna-align/RBAM_018360.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03017-RBAM_018360.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03017-RBAM_018360.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03017
# 2: RBAM_018360
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity: 161/237 (67.9%)
# Similarity: 161/237 (67.9%)
# Gaps: 39/237 (16.5%)
# Score: 542.5
#
#
#=======================================
BSNT_03017 1 ATGACGGTTAGCATA------CAAATGGCAGGAAACCTGTGGAAAGTCCA 44
||||..|| |||| ||.|||||.|||||||||||||||.|.||
RBAM_018360 1 ATGAGCGT---CATAAAAATTCAGATGGCGGGAAACCTGTGGAAAATTCA 47
BSNT_03017 45 CGTCAAAGCC-GGCGACCAAATCGAAAAGGGCCAGGAGGTAGCCATTTTG 93
.|| .||||| ||.||....||.|||.|.||.|||||.||.|||||.|||
RBAM_018360 48 TGT-GAAGCCGGGTGATGTCATTGAAGAAGGACAGGAAGTGGCCATCTTG 96
BSNT_03017 94 GAATCGATGAAAATGGAAATCCCGATCGTTGCAGATAGAAGCGGAATCGT 143
|||||.||||||||||||||.|||||..|.||.||| |.||||| ||
RBAM_018360 97 GAATCTATGAAAATGGAAATTCCGATTATCGCTGAT-GCAGCGG----GT 141
BSNT_03017 144 A-----AAAGAAGTCAAAAAAAATGAAGGAGACTT---TGTAAATGAAGG 185
| ||||||||.||||||...|||||.||.|| || |||||||
RBAM_018360 142 ACGGTGAAAGAAGTGAAAAAATCAGAAGGTGATTTCACTG---ATGAAGG 188
BSNT_03017 186 AGACGTACTGCTCGAACTGAGCAATTCCACTCAATAA 222
|||.||.|||.|.||||| |||||||
RBAM_018360 189 AGAGGTCCTGATTGAACT------------TCAATAA 213
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