Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03038 and RBAM_018470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:54
# Commandline: needle
# -asequence dna-align/BSNT_03038___dacC.1.9828.seq
# -bsequence dna-align/RBAM_018470___dacC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03038___dacC-RBAM_018470___dacC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03038___dacC-RBAM_018470___dacC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03038___dacC
# 2: RBAM_018470___dacC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1610
# Identity: 1000/1610 (62.1%)
# Similarity: 1000/1610 (62.1%)
# Gaps: 238/1610 (14.8%)
# Score: 2819.0
#
#
#=======================================
BSNT_03038___ 1 ATGATGAAGCGCAGAGAGGCGGGGAAATTAATGAAAAAAAGCAT------ 44
.|||||| |||
RBAM_018470__ 1 ------------------------------TTGAAAA----CATATGTGA 16
BSNT_03038___ 45 AAAGCTTTATGTTGC----TGTTTTACTGCTTTTCGTCATTGCTTCGGTG 90
||.||||.| || ||.|| ||||||||..|||||||..|.||.
RBAM_018470__ 17 AACGCTTGA----GCGCGGTGATT--CTGCTTTTGATCATTGCCGCAGTT 60
BSNT_03038___ 91 CCTTATATGCATCAGGCTGCGCTTGCCGCTGAAAAACAAGATGCACTTTC 140
||||||||..||.|.||.||....||.||||||.||.||.|| |||||
RBAM_018470__ 61 CCTTATATTGATGATGCGGCTAAGGCGGCTGAACAAAAAAAT--ACTTT- 107
BSNT_03038___ 141 CGGGCAGATCGATAAGATTTTAGCTG----ATCATCCTG---------CC 177
||| |.||| ||||| | |||.||| ||
RBAM_018470__ 108 ---GCA-----AAAAG-----AGCTGGAACA-CATTCTGGATGAAGAACC 143
BSNT_03038___ 178 --CTCGAA--GGCGCAATGGCCGGCATCACCGTTCGCTCTGCGGAAAC-- 221
||..|| ||.||....||.|||.|||..||.||.||.||..||||
RBAM_018470__ 144 AACTTTAAAGGGAGCTTCAGCGGGCGTCAGTGTCCGGTCAGCAAAAACAG 193
BSNT_03038___ 222 ---AGGTGCTGTTCTATATGAACATTCAGG-AGACACCCGAATGAGGCCT 267
||||||||||| ..||..|.|| |||.|..||..||.|||||
RBAM_018470__ 194 GGGAGGTGCTGTTC------GGCAGCCGGGAAGATATGCGGCTGCGGCCT 237
BSNT_03038___ 268 GCCTCTTCT-CTAAAGCTTTTGACAGCGGCCGCGGCACTTTCTGTCCTTG 316
||.|| .|| .|.|||||..||||.||..|.||.||.|||||.||.||.|
RBAM_018470__ 238 GCATC-ACTGATGAAGCTGCTGACGGCATCTGCAGCGCTTTCCGTTCTCG 286
BSNT_03038___ 317 GCGAGAACTATTCTTTTACAACCGAGGTCCGGACGGATGGAACACTGAAA 366
|.||..|.||..|.||||..||.||.||.|||.|.||.||..|..|.|||
RBAM_018470__ 287 GAGAAGATTACACCTTTAAGACAGAAGTACGGGCAGACGGCGCCGTAAAA 336
BSNT_03038___ 367 GGGAAAAAGCTGAATGGTAACCTTTATTTGAAAGGGAAAGGCGATCCGAC 416
||.|||.|||||...||.|||||||||.|.|..||.||||||||||||||
RBAM_018470__ 337 GGAAAACAGCTGCGCGGAAACCTTTATCTCAGGGGAAAAGGCGATCCGAC 386
BSNT_03038___ 417 ACTTTTACCATCTGATTTTGACAAAATGGCTGAGAAATTGAAAAATTCC- 465
.||.||....|||||||||||.||.|||||| |||..|...||..||
RBAM_018470__ 387 CCTATTGGTTTCTGATTTTGAGAAGATGGCT---AAACAGGTCAAAGCCA 433
BSNT_03038___ 466 --GGCGTAAAAGTAATTAAAGGCAATCTGATCGGTGATGATACGTGGCAT 513
|||.|..|.||.||||||||..|||||.||||.||||||.|||||.||
RBAM_018470__ 434 GGGGCATCCATGTCATTAAAGGAGATCTGGTCGGGGATGATTCGTGGTAT 483
BSNT_03038___ 514 GATGACATGCGAT------TA-TCACCTGATATGCCTTGGAGCGATGAAT 556
|| |||| || |||..||||.|.||.||||||||||||.
RBAM_018470__ 484 GA-------CGATACCAGGTATTCAGTTGATCTTCCGTGGAGCGATGAAG 526
BSNT_03038___ 557 ACACATATTATGGCGCGCCAATCTCCGCTCTAACAGCGTCTCCGAATGAA 606
.|..||||||||||||||.|.|.||.|||||.||.||.||.||.|||||.
RBAM_018470__ 527 GCCAATATTATGGCGCGCAAGTATCAGCTCTTACCGCTTCACCAAATGAG 576
BSNT_03038___ 607 GACTATGATGCAGGCACTGTGATTGTTGAGGTCACCCC----AAATCA-- 650
||.||||||.|.||.||.|||||||..||..|||.||| ||| ||
RBAM_018470__ 577 GATTATGATACCGGAACGGTGATTGCGGAAATCAGCCCGGCGAAA-CAGC 625
BSNT_03038___ 651 -----AAAAGAAGGGGAAGAGCCTGC-CGTGTCTGTCTCTCCGAAAACCG 694
|||| |||| || |.|.||..|.|||||..|.||.|
RBAM_018470__ 626 CCGGTAAAA----------AGCC-GCGCATTTCGATTTCTCCCCATACGG 664
BSNT_03038___ 695 A-----TTATATAACG-ATAAAGAACGATGCTGAAA--CGACTGCTGCCG 736
| || || .|.||.||.||.| ||||| ||.| |||.|.|
RBAM_018470__ 665 ACGTCGTT------CGTGTGAAAAATGAAG-TGAAAACCGTC-GCTTCTG 706
BSNT_03038___ 737 GTTCAGAGAAAGACCTCACAATCGAAAGAGAGCATGGAACAAACACGATT 786
.|..|.|||||||..|.||..|.|||.|.|||||.||....||...||||
RBAM_018470__ 707 ATGAAAAGAAAGATTTGACGGTTGAACGGGAGCACGGTGGCAATGTGATT 756
BSNT_03038___ 787 ACAATTGAAGGG-AGCGTACC-----GGTTGACTCAAACAAGACAAAGGA 830
||.| |.||||| |.|.|||| |.|.|.|.||..||||| ||
RBAM_018470__ 757 ACGA-TAAAGGGAACCATACCTGCCGGCTCGGCACAGGCAAGA-----GA 800
BSNT_03038___ 831 ATGGATTTCTGTCTGGGAGCCTGCCG-GATATGCCTTAGATTTATTTAAG 879
||||....|.||.|||||.|| |.|| ..|||||.||||||||||..||.
RBAM_018470__ 801 ATGGGCGGCAGTGTGGGATCC-GTCGTCCTATGCTTTAGATTTATGGAAA 849
BSNT_03038___ 880 CAGTCACTAAAAAAACAAGGTATTACTGTGAAAGGGGACATCAAGAC-GG 928
||..|.||.|..|||||.|||||.|||||.||||||.|.||||..|| ||
RBAM_018470__ 850 CAAGCGCTTACTAAACAGGGTATAACTGTAAAAGGGAAAATCAGAACAGG 899
BSNT_03038___ 929 GTGAA---------GCACCTAGTTCTTCAGATGTGCTGCTCTCTCATCGC 969
|.||| |||||.||.| |.||.||||.|
RBAM_018470__ 900 GCGAATGCCGCACCGCACCCAGCT---------------TGTCACATCAC 934
BSNT_03038___ 970 -----TCAATGCCTTTATC-GAAACTTTTTG-TGCCGTTCATGAAATTAA 1012
||.||||||.|.|| ||| ||.||| |.|||||.||||||.|.|
RBAM_018470__ 935 GGACATCCATGCCTCTTTCAGAA--TTATTGATCCCGTTTATGAAACTGA 982
BSNT_03038___ 1013 GTAATAACGGACATGCCGAAGTGCTCGTAAAAGAGATGGGGAAAGTGAAA 1062
|.||.|||||.||.||||||.|.||..|.||.||.|||||.|||||||||
RBAM_018470__ 983 GCAACAACGGGCACGCCGAAATTCTGATCAAGGAAATGGGAAAAGTGAAA 1032
BSNT_03038___ 1063 AAAGGAGAAGGGAGCTGGGAAAAGGGGCTCGAAGTGTT--AAACAGTACA 1110
|||||.||.||.||||||||||||||..|.||.|||.| ||.|||..|.
RBAM_018470__ 1033 AAAGGGGAGGGCAGCTGGGAAAAGGGCTTGGACGTGATGAAATCAGAGCT 1082
BSNT_03038___ 1111 CTTCCAAAAT--TTGGTGTTGATTCTAAATCACTCGTCTT--AAGGGACG 1156
| |||| ||.|.|.|||.||...||.|.|.| .|| |||.||||
RBAM_018470__ 1083 C-----AAATCGTTCGGGCTGAATCCGGATGAATTG-ATTGCAAGAGACG 1126
BSNT_03038___ 1157 GATCAGGAATCTCACATATTGATGCTGTATCCTCAGATCAACTTTCACAG 1206
|||||||..|.||.||||||.|.|..||||||.|.|..|||.|...|.||
RBAM_018470__ 1127 GATCAGGCGTTTCTCATATTAACGGCGTATCCGCCGGCCAAATCGGAGAG 1176
BSNT_03038___ 1207 CTGTTATATGACATTCAGGATCAGAGTTGGTTCTCGGCTTATCTAAATTC 1256
||.||.||||...|||||.|..|.|..||||.|.||||||..||...|||
RBAM_018470__ 1177 CTTTTGTATGCGGTTCAGAAAGAAAAGTGGTACCCGGCTTTCCTTCGTTC 1226
BSNT_03038___ 1257 ATTACCTGTTGC--GGGCAACCCTGACAGAATGGTGGGCGGAACGCTGAG 1304
..|.|||||.|| |.|||| .||||||||||..|||.|||||.||..|
RBAM_018470__ 1227 GCTTCCTGTCGCCGGTGCAA--GTGACAGAATGACGGGAGGAACCCTTCG 1274
BSNT_03038___ 1305 AAACCGCATGAAAGACACTCCTGCACAAGGAAA-AGTAAGAGCAAAAACC 1353
.||.||..||||.|.|||.||.||..|.||||| |.||| |||.||||||
RBAM_018470__ 1275 GAATCGGCTGAAGGGCACCCCGGCGGAGGGAAAGATTAA-AGCGAAAACC 1323
BSNT_03038___ 1354 GGATCGC-----TCAGTACGGTAAGCTCTCTAT--CGGGGTACGCAGAAA 1396
|||||.| ||||| |.|| ||.|| |.||.||.|||||.|
RBAM_018470__ 1324 GGATCACTAACATCAGT-CAGT------TCGATTGCCGGCTATGCAGACA 1366
BSNT_03038___ 1397 CAAAGAGCGGAAAAAAACTTGTTTTCTCTATTCTTCTAAATGGATTGATT 1446
||||.|..|||.|.|..|||.||||.||..|.||||.||||||..||.||
RBAM_018470__ 1367 CAAAAACAGGAGATACGCTTATTTTTTCCGTGCTTCAAAATGGGCTGCTT 1416
BSNT_03038___ 1447 GATGAAGAGGATGGAAAAGATATTGAGGATCAAATCGCTGTCATTTTGGC 1496
||.|||||.||.||||||||.|||||.||..||||.||.|||.|..||||
RBAM_018470__ 1417 GACGAAGATGACGGAAAAGACATTGAAGACAAAATTGCAGTCGTGCTGGC 1466
BSNT_03038___ 1497 AAATCAATAA 1506
||||||||||
RBAM_018470__ 1467 AAATCAATAA 1476
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