Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03048 and RBAM_018520

See Amino acid alignment / Visit BSNT_03048 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:54
# Commandline: needle
#    -asequence dna-align/BSNT_03048.1.9828.seq
#    -bsequence dna-align/RBAM_018520.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03048-RBAM_018520.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03048-RBAM_018520.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03048
# 2: RBAM_018520
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 547
# Identity:     426/547 (77.9%)
# Similarity:   426/547 (77.9%)
# Gaps:           2/547 ( 0.4%)
# Score: 1634.0
# 
#
#=======================================

BSNT_03048         1 ATGCATATTGTACAGCCGATTCGCAGTCTAGAGAAAATCCAAGAAGTCAA     50
                     ||||||||.|||||||||||.||.|||.|.|||||.|||||.||||||||
RBAM_018520        1 ATGCATATCGTACAGCCGATCCGAAGTTTGGAGAAGATCCAGGAAGTCAA     50

BSNT_03048        51 ACAGTATTTGCTTAACAAAAACAAGCGGGATTATTTTCTGTTTATTTTCG    100
                     |||||||||..|.||.||||...|.||.|||||||||.|.||||||||.|
RBAM_018520       51 ACAGTATTTAATGAAGAAAAGTGATCGTGATTATTTTTTATTTATTTTTG    100

BSNT_03048       101 GCATCAACAGCGCGCTCCGCATTTCTGATATTCTGCCGCTGCAAGTGAAG    150
                     ||||.||||||||.||.||.|||||||||.||||||||||.|..||||.|
RBAM_018520      101 GCATGAACAGCGCACTGCGGATTTCTGATGTTCTGCCGCTTCGCGTGAGG    150

BSNT_03048       151 GACGTTCA-AAATAAAGATCATTTATGGGCGACTGAAAGCAAAACGAAAA    199
                     ||.| ||| .||.|||||.|||.|.|||||.||.|||||||||||||.||
RBAM_018520      151 GATG-TCAGGAACAAAGACCATGTGTGGGCAACCGAAAGCAAAACGAGAA    199

BSNT_03048       200 AGAAAAGAAAGATTCTTATTTTAGAATCGCTGAAACAGGAAATATACGAG    249
                     ||||||||||.|||||.||..|.||.||..|.||....||.|||||||..
RBAM_018520      200 AGAAAAGAAAAATTCTGATACTGGAGTCTTTAAAGGCCGACATATACGCT    249

BSNT_03048       250 TATACGAAAGACATGAAGGAAAACGAATATCTTTTTAAATCAGTGCGCAC    299
                     |||||.|||||||||||.||..|.||.|||.|.||||||||....||.||
RBAM_018520      250 TATACAAAAGACATGAAAGAGGATGACTATTTGTTTAAATCGAAACGGAC    299

BSNT_03048       300 CAGGAAGCCGATTTCCCGCATTCAGGCCTACAGAATTTTAAGAGAGGCCG    349
                     .|..|||||.||.|||||.||||||||.||||||||.||||..||.||.|
RBAM_018520      300 GAATAAGCCCATATCCCGGATTCAGGCATACAGAATATTAAAGGAAGCGG    349

BSNT_03048       350 CTGCGGCGTGCGGACTTGAAGAGATAGGGACGCATACACTCCGGAAAACG    399
                     ||||.||.|||||..|.||.||.||.||.|||||.||.||..|.||.|||
RBAM_018520      350 CTGCCGCTTGCGGGTTGGAGGAAATCGGAACGCACACGCTTAGAAAGACG    399

BSNT_03048       400 TTTGGCTATCATTTTTATCAGCGAACGAAAGACATCGCCGAGCTGCAGAG    449
                     ||.||.|||||||||||||||.|.||.||||||||.||.||.||||||||
RBAM_018520      400 TTCGGGTATCATTTTTATCAGAGGACAAAAGACATTGCTGAACTGCAGAG    449

BSNT_03048       450 AATACTGAATCATTCATCACCATCAATTACAATGCGGTATATCGGTATTG    499
                     .||..|.||||||||.||.||.||.|||||||||||.||||||||.||.|
RBAM_018520      450 GATTTTAAATCATTCTTCTCCGTCGATTACAATGCGTTATATCGGAATAG    499

BSNT_03048       500 ATGAAGATACGACAAGAGCCGCATATAAGGTTTTTGGAGGGCTTTAA    546
                     |||||||||||||.||||||||.|||||.||.||.||||||||.||.
RBAM_018520      500 ATGAAGATACGACGAGAGCCGCCTATAAAGTGTTCGGAGGGCTGTAG    546


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