Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03114 and RBAM_018890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence dna-align/BSNT_03114___yozA.1.9828.seq
# -bsequence dna-align/RBAM_018890___yozA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03114___yozA-RBAM_018890___yozA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03114___yozA-RBAM_018890___yozA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03114___yozA
# 2: RBAM_018890___yozA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity: 259/335 (77.3%)
# Similarity: 259/335 (77.3%)
# Gaps: 13/335 ( 3.9%)
# Score: 998.5
#
#
#=======================================
BSNT_03114___ 1 ATGACTGAATTT--AGA-----GAAACGGAACAAT----CGGCTGCTGAT 39
|||||||||||| .|| ||||| ||.||| |.||||..|||
RBAM_018890__ 1 ATGACTGAATTTCACGAATCCGGAAAC--AAAAATGACCCCGCTGTCGAT 48
BSNT_03114___ 40 CTGGACGAGGAGACGCTGTTTCTAGTCGCGCAAACATTCAAAGCGCTTTC 89
.|.||.|||||.||..|.|||.|.||.||.||.||.||.||.|||.|.||
RBAM_018890__ 49 TTAGATGAGGAAACTTTATTTTTGGTTGCCCAGACTTTTAAGGCGTTGTC 98
BSNT_03114___ 90 TGATCCAACCCGAATCAGGATTCTCCATTTATTGTCCCAGGGAGAACATG 139
||||||.|||.|||||||.|||||||||||..||||.|||||.||.||.|
RBAM_018890__ 99 TGATCCGACCAGAATCAGAATTCTCCATTTGCTGTCACAGGGTGAGCACG 148
BSNT_03114___ 140 CTGTAAACGGAATTGCAGAAAAGCTGAATTTACTGCAATCCACCGTGTCC 189
|.|||||.|..||.|||||||||||||||||.|||||.||.|||||.||.
RBAM_018890__ 149 CGGTAAATGATATCGCAGAAAAGCTGAATTTGCTGCAGTCTACCGTTTCT 198
BSNT_03114___ 190 CACCAGCTTAGATTTTTGAAAAATCTTCGGCTTGTCAAATCGCGCAGAGA 239
||.|||||..|.|||.|.||||||||.||.||.||||||||.||||||||
RBAM_018890__ 199 CATCAGCTGCGTTTTCTTAAAAATCTGCGCCTCGTCAAATCACGCAGAGA 248
BSNT_03114___ 240 AGGAACATCGATTTATTACTCTCCGGAGGATGAACATGTTTTAGATGTTC 289
|||||||||.||.|||||.|||||.||||||||||||||.||||||||.|
RBAM_018890__ 249 AGGAACATCCATCTATTATTCTCCTGAGGATGAACATGTGTTAGATGTGC 298
BSNT_03114___ 290 TTCAGCAAATGATCCATCATACACAGCATGATTGA 324
|||||||||||||.||.|||||.|.|||.||||.|
RBAM_018890__ 299 TTCAGCAAATGATTCACCATACGCGGCACGATTAA 333
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