Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03152 and RBAM_019120
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:01
# Commandline: needle
# -asequence dna-align/BSNT_03152___odhB.1.9828.seq
# -bsequence dna-align/RBAM_019120___odhB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03152___odhB-RBAM_019120___odhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03152___odhB-RBAM_019120___odhB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03152___odhB
# 2: RBAM_019120___odhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1263
# Identity: 1048/1263 (83.0%)
# Similarity: 1048/1263 (83.0%)
# Gaps: 24/1263 ( 1.9%)
# Score: 4378.5
#
#
#=======================================
BSNT_03152___ 1 ATGGCGGAAATTAAGGTACCTGAATTAGCAGAATCAATCTCAGAAGGAAC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_019120__ 1 ATGGCGGAAATTAAGGTACCTGAATTAGCAGAATCAATCTCAGAAGGAAC 50
BSNT_03152___ 51 AATAGCCCAATGGTTAAAGCAGCCTGGTGACTATGTAGAACAGGGTGAAT 100
.|||||||||||||||||||||||.|||||.|||||||||||||||||.|
RBAM_019120__ 51 GATAGCCCAATGGTTAAAGCAGCCCGGTGATTATGTAGAACAGGGTGAGT 100
BSNT_03152___ 101 ATCTGCTTGAACTAGAAACGGATAAAGTGAATGTTGAATTGACAGCAGAA 150
|..||||||||||.||.|||||.|||||.|||||||||||||||||||||
RBAM_019120__ 101 ACTTGCTTGAACTGGAGACGGACAAAGTAAATGTTGAATTGACAGCAGAA 150
BSNT_03152___ 151 GAATCGGGTGTACTTCAAGAGGTATTGAAAGATTCGGGTGATACCGTCCA 200
|||||||||||.||..||||||||||||||||||||||||||||||||||
RBAM_019120__ 151 GAATCGGGTGTTCTAAAAGAGGTATTGAAAGATTCGGGTGATACCGTCCA 200
BSNT_03152___ 201 GGTCGGAGAAATTATCGGTACGATTTCAGAAGGCGCGGGTGAAAGTTCTG 250
.||.|||||||||||||||||.|||.||||||||||.||.||||||||||
RBAM_019120__ 201 AGTAGGAGAAATTATCGGTACCATTACAGAAGGCGCTGGCGAAAGTTCTG 250
BSNT_03152___ 251 CCCCTGCTCCTACAGAGAAAG-----CAGAAAGCAAGGA--AAGCGTAA- 292
|.||.||.|||.| |||||| ||| .|||.|| ||.||.||
RBAM_019120__ 251 CACCCGCCCCTTC--AGAAAGTGCTCCAG---CCAATGAACAAACGAAAG 295
BSNT_03152___ 293 AAGAAGAGAAACAGGCTGAACCAGCTGCACAAGAGGTGAGCGAGGAAGCA 342
|.||||..||| ||||||||.|||||||||||.||.|||.||||||||
RBAM_019120__ 296 AGGAAGCAAAA---GCTGAACCTGCTGCACAAGAAGTCAGCCAGGAAGCA 342
BSNT_03152___ 343 CAATCTGAAGCAAAATCAAGAACGATCGCTTCTCCGTCGGCCCGTAAGCT 392
|||||.|||||.|||||.||||||.|.||.||||||.|.||.||.|||||
RBAM_019120__ 343 CAATCAGAAGCGAAATCCAGAACGGTAGCGTCTCCGGCTGCACGCAAGCT 392
BSNT_03152___ 393 GGCGAGAGAAAAAGGAATTGACCTGTCTCAAGTTCCAACTGGAGATCCGC 442
|||.||.||||||||||||||.||.||.|||.||||.||.||.||.||||
RBAM_019120__ 393 GGCAAGGGAAAAAGGAATTGATCTATCACAAATTCCGACGGGGGACCCGC 442
BSNT_03152___ 443 TTGGAAGAGTGCGCAAGCAGGATGTCGAAGCGTACGAAAAACCGGCATCA 492
|.||..|.||||||||.||.|||||.|||||.||.|||||||||||.|||
RBAM_019120__ 443 TCGGCCGCGTGCGCAAACAAGATGTGGAAGCTTATGAAAAACCGGCTTCA 492
BSNT_03152___ 493 AAACCGGCTCCTCAGCAAAAGCAGCAGCCTCAGGCTCAAAAAGCACAGCA 542
|||||.||..|.||||..||.||| ||||||||||||.|||||||
RBAM_019120__ 493 AAACCTGCGGCACAGCCGAAACAG------CAGGCTCAAAAAACACAGCA 536
BSNT_03152___ 543 AAGCTTTGAAAAACCTGTTGAAGTGCAAAAAATGTCACGCCGCAGACAAA 592
|||||||||.||||||||.|||||||||||||||||.|||||||||||.|
RBAM_019120__ 537 AAGCTTTGACAAACCTGTCGAAGTGCAAAAAATGTCCCGCCGCAGACAGA 586
BSNT_03152___ 593 CGATTGCAAAACGCCTTGTAGAGGTACAGCAAACATCAGCGATGCTGACC 642
||||.||.|||||..|.||.||.||.|||||.||.||.|||||||||||.
RBAM_019120__ 587 CGATCGCGAAACGATTGGTTGAAGTGCAGCAGACTTCTGCGATGCTGACT 636
BSNT_03152___ 643 ACATTTAATGAAGTGGACATGACGGCTGTCATGAATCTCAGAAAACGCCG 692
||||||||.|||||.|||||||||||.||.||||||||.|||||||||||
RBAM_019120__ 637 ACATTTAACGAAGTTGACATGACGGCCGTTATGAATCTAAGAAAACGCCG 686
BSNT_03152___ 693 CAAAGATCAATTCTTTGAGCAAAATGAAGTGAAGCTCGGCTTTATGTCTT 742
||||||.||||||.||||||||||.||.||.||.|||||.||.|||||.|
RBAM_019120__ 687 CAAAGACCAATTCCTTGAGCAAAACGATGTAAAACTCGGTTTCATGTCGT 736
BSNT_03152___ 743 TCTTCACGAAAGCGGTCGTGGCTGCATTGAAAAAATATCCGCTGTTGAAT 792
||||.||.|||||.||||||||||||||||||||||..|||||..|.||.
RBAM_019120__ 737 TCTTTACAAAAGCCGTCGTGGCTGCATTGAAAAAATTCCCGCTCCTTAAC 786
BSNT_03152___ 793 GCAGAAATTCAAGGCGATGAGTTGATCGTTAAAAAATTCTACGATATCGG 842
||.||||||||||||||||||.|||||||.|||||||||||.||.|||||
RBAM_019120__ 787 GCTGAAATTCAAGGCGATGAGCTGATCGTGAAAAAATTCTATGACATCGG 836
BSNT_03152___ 843 AATCGCTGTTGCTGCTGATGAAGGCCTTGTCGTTCCGGTTGTGCGGGATG 892
.||.|||||.||.|||||.|||||.||||||||.||.||.|||||.||.|
RBAM_019120__ 837 TATTGCTGTCGCGGCTGAAGAAGGGCTTGTCGTCCCAGTCGTGCGTGACG 886
BSNT_03152___ 893 CGGATCGCCTGACATTTGCAGGAATCGAAAAAGAGATCGGCGAGCTTGCG 942
|.||.||||||||.|||||.||.||.||||.||||||||||||.||||||
RBAM_019120__ 887 CTGACCGCCTGACGTTTGCCGGCATTGAAAGAGAGATCGGCGAACTTGCG 936
BSNT_03152___ 943 AAAAAAGCAAGAAACAATAAATTAACCCTTA-GCGAGCTTCAGGGAGGCT 991
||.|||||..||||||||||||||| |.||| |.|||||.||.|||||||
RBAM_019120__ 937 AAGAAAGCGCGAAACAATAAATTAA-CATTAGGTGAGCTGCAAGGAGGCT 985
BSNT_03152___ 992 CTTTCACGATTACAAACGGAGGGACTTTCGGTTCATTGATGTCAACTCCA 1041
|.||||||||.|||||||||||.||.|||||.||..|.||||||||.||.
RBAM_019120__ 986 CCTTCACGATCACAAACGGAGGTACATTCGGATCGCTTATGTCAACACCG 1035
BSNT_03152___ 1042 ATTTTAAACAGCCCGCAAGTCGGTATACTGGGCATGCATAAGATTCAGCT 1091
||..||||||||||.||.||.||.||..|.||.|||||.||.||||||||
RBAM_019120__ 1036 ATCCTAAACAGCCCTCAGGTTGGGATCTTAGGTATGCACAAAATTCAGCT 1085
BSNT_03152___ 1092 GCGCCCTGTAGCCATTGATGAAGAGCGTTTCGAAAACCGTCCGATGATGT 1141
||||||.|||||.|||||||..|||||.|..|||||||||||||||||||
RBAM_019120__ 1086 GCGCCCAGTAGCGATTGATGCGGAGCGCTCTGAAAACCGTCCGATGATGT 1135
BSNT_03152___ 1142 ATATCGCTTTATCTTATGATCACCGAATTGTAGACGGTAAAGAAGCGGTT 1191
|.|||||||||||.||.||||||.||||||||||.||||||||||||||.
RBAM_019120__ 1136 ACATCGCTTTATCATACGATCACAGAATTGTAGATGGTAAAGAAGCGGTC 1185
BSNT_03152___ 1192 GGTTTCCTCGTGACAATCAAAAATTTACTGGAAGATCCTGAACAGCTTTT 1241
||.|||||.||.||.||.|||||..|.||.||||||||.||||||||.||
RBAM_019120__ 1186 GGATTCCTTGTCACCATTAAAAACCTGCTTGAAGATCCGGAACAGCTGTT 1235
BSNT_03152___ 1242 ATTAGAAGGATAA 1254
..|.|||||||||
RBAM_019120__ 1236 GCTGGAAGGATAA 1248
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