Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03153 and RBAM_019130

See Amino acid alignment / Visit BSNT_03153 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:02
# Commandline: needle
#    -asequence dna-align/BSNT_03153___kgd.1.9828.seq
#    -bsequence dna-align/RBAM_019130___sucA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03153___kgd-RBAM_019130___sucA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03153___kgd-RBAM_019130___sucA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03153___kgd
# 2: RBAM_019130___sucA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2840
# Identity:    2343/2840 (82.5%)
# Similarity:  2343/2840 (82.5%)
# Gaps:          10/2840 ( 0.4%)
# Score: 9676.5
# 
#
#=======================================

BSNT_03153___      1 ATGTTTCAAAATAGTATGAAACAACGAATGAATTGGGAAGATTTTTACGG     50
                     |||||||||||||.||||||||||.|||||||||||||||||||||||||
RBAM_019130__      1 ATGTTTCAAAATAATATGAAACAAAGAATGAATTGGGAAGATTTTTACGG     50

BSNT_03153___     51 TCCGAACCTCGGCTATGCGCTGGAGCTTTACGATCAGTATACCCAGGATC    100
                     .||||||||||||||.||.||||||||.|||||.||.|||.|..|.||||
RBAM_019130__     51 ACCGAACCTCGGCTACGCACTGGAGCTGTACGACCAATATGCTGAAGATC    100

BSNT_03153___    101 CGAACAGCATTGACCCGGATTTGAAGGAAATGTTCGACGAGCTCGGTGCT    150
                     |..||||||||||.||||||.||||.||.|||||.|||||.|||||.|||
RBAM_019130__    101 CAGACAGCATTGATCCGGATCTGAAAGACATGTTTGACGAACTCGGCGCT    150

BSNT_03153___    151 CCGCCAAGCGATATAAAAGAGGCCTCGGGAACAAAAGAAAAGGGACGTGT    200
                     |||||||||.|.|||||||||||.|||||||||||.|||.|||||||.||
RBAM_019130__    151 CCGCCAAGCCAAATAAAAGAGGCATCGGGAACAAAGGAACAGGGACGCGT    200

BSNT_03153___    201 TACAGCCGATCTGATTCAAAAGATCGCATCCGCAGTCAGACTTGCAGAAG    250
                     .||.||.|||||||||||||||||||||.|.|||||.|.|||||||||||
RBAM_019130__    201 CACCGCAGATCTGATTCAAAAGATCGCAGCAGCAGTTAAACTTGCAGAAG    250

BSNT_03153___    251 ATATCCGAACCTATGGCCATTTGAACGCTTCCGTCAATCCGCTCAGAAAG    300
                     ||||.|||||||||||||||.|||||||||||||||||||||||||||||
RBAM_019130__    251 ATATTCGAACCTATGGCCATCTGAACGCTTCCGTCAATCCGCTCAGAAAG    300

BSNT_03153___    301 GATGAGAAAAAGAGCGAACTTTTTCCATTATCCGATTACGGGCTAACAGA    350
                     |||..||||||||||||.||.|||||.|||||||||||||||||.|||||
RBAM_019130__    301 GATCCGAAAAAGAGCGAGCTCTTTCCGTTATCCGATTACGGGCTTACAGA    350

BSNT_03153___    351 AGAGGAAATAAAAGCAATACCTGCGTCTGTCATCTGCAAAGACGCTCCTA    400
                     |||.|||||.|||||||||||.||||||||||||||.||||||||.|||.
RBAM_019130__    351 AGAAGAAATGAAAGCAATACCCGCGTCTGTCATCTGTAAAGACGCACCTG    400

BSNT_03153___    401 AAAACATTACGAACGGTTTAGAAGCCATTCAGTATTTACGAAATACGTAT    450
                     ..||.||.||.|||||.|||||||||||.|||.|||||||.|||||.|||
RBAM_019130__    401 CCAATATAACAAACGGCTTAGAAGCCATCCAGCATTTACGCAATACCTAT    450

BSNT_03153___    451 AAAAGAACCATCTCTTTTGAATTTGACCATGTGCATGACTTCAAAGAGCG    500
                     ||||||||||||||.||.||.|||||||||||||||||.|||.|||||||
RBAM_019130__    451 AAAAGAACCATCTCCTTCGAGTTTGACCATGTGCATGATTTCGAAGAGCG    500

BSNT_03153___    501 CGAGTGGCTGACAAGAAAGATTGAATCTGGCGAGCTGTTCCAGAAGAACT    550
                     ||..|||.|.||||.||.|.|.|||||.||.||.|||||||.|||.||.|
RBAM_019130__    501 CGCATGGATTACAAAAATGGTCGAATCCGGAGAACTGTTCCGGAAAAATT    550

BSNT_03153___    551 CAGCTGAAAAGCTGTCAGCTGTGCTGGAAAGATTGACAGAAGTAGAGGGC    600
                     ||.|.|||||.||||||||.||..|.||||||.||||.||||||||.||.
RBAM_019130__    551 CACCGGAAAAACTGTCAGCCGTTTTAGAAAGACTGACGGAAGTAGAAGGA    600

BSNT_03153___    601 TTTGAGCAGTTTTTGCACCGCACATTCGTCGGGCAGAAGCGCTTTTCCAT    650
                     |||||.||.|||||.|||||.|||||||||||.||||||||.||.||.||
RBAM_019130__    601 TTTGAACAATTTTTACACCGGACATTCGTCGGTCAGAAGCGTTTCTCAAT    650

BSNT_03153___    651 TGAGGGTCTGGACGCTCTTGTTCCAGTGCTTGATGACATTATTGCACAAT    700
                     ||||||..|.|||||.|||||.||.||.|||||.||||||||.||.||.|
RBAM_019130__    651 TGAGGGATTAGACGCGCTTGTGCCGGTTCTTGACGACATTATCGCCCAGT    700

BSNT_03153___    701 CTGTCAAATCAGGCACGACAAGCGTCAACATCGGGATGGCGCACAGGGGA    750
                     ||||.|||.|.|||||.||.|..|||||.|||||||||||||||||.||.
RBAM_019130__    701 CTGTGAAAGCGGGCACAACCAATGTCAATATCGGGATGGCGCACAGAGGC    750

BSNT_03153___    751 CGCCTGAATGT-CTTGGCACATGTGCTCGGCAAACCGTATGAAATCATCT    799
                     ||..|.||||| ||| ||.|||||||||||||||||||||||.||.||.|
RBAM_019130__    751 CGTTTAAATGTGCTT-GCGCATGTGCTCGGCAAACCGTATGAGATTATTT    799

BSNT_03153___    800 TCTCTGAATTCCAGCATGCGCCGAATAAAGATCTTGTCCCGTCTGAGGGA    849
                     ||||.||||||||||||||||||||||||||.|||||.||||||||.|||
RBAM_019130__    800 TCTCAGAATTCCAGCATGCGCCGAATAAAGACCTTGTGCCGTCTGAAGGA    849

BSNT_03153___    850 TCAATTGGAATCAGCTACGGATGGACAGGGGATGTCAAATACCATTTGGG    899
                     ||.|..||.|||||||||||.|||||.||.|||||.||||||||..|.||
RBAM_019130__    850 TCGACCGGCATCAGCTACGGCTGGACGGGCGATGTAAAATACCACCTCGG    899

BSNT_03153___    900 GGCGAATCGGGAGCTTCAAGACGCTGAAACAAAATCAGCGCGCATTACGT    949
                     .||..|..|..|||||||.||.||||||||.|||...|||||.||||||.
RBAM_019130__    900 TGCAGACAGACAGCTTCAGGATGCTGAAACCAAAAGTGCGCGGATTACGC    949

BSNT_03153___    950 TAGCGAACAATCCGAGCCACTTGGAATTTATCAATCCGATTGTTGAAGGC    999
                     |.||.||.||.|||||||||||||||||.||||||||||||||.|||||.
RBAM_019130__    950 TTGCAAATAACCCGAGCCACTTGGAATTCATCAATCCGATTGTGGAAGGA    999

BSNT_03153___   1000 AGCACAAGAGCAGCACAGGAAACGCGAACACAAAGCGGATACCCGGTACA   1049
                     |||||..|.||.|||||||||||..||||.||||..||.||||||||.||
RBAM_019130__   1000 AGCACGCGGGCGGCACAGGAAACAAGAACGCAAAAGGGGTACCCGGTTCA   1049

BSNT_03153___   1050 AGATGAAACAAAATCGCTTGCCATTTTAATCCATGGAGACGCTGCATTTC   1099
                     |||.||||||||||||||.|||||||||||.||.||.|||||.||.||||
RBAM_019130__   1050 AGACGAAACAAAATCGCTCGCCATTTTAATTCACGGTGACGCAGCGTTTC   1099

BSNT_03153___   1100 CTGGGGAAGGAATTGTAGCTGAAACATTGAATTTAAGCTCTTTAAAAGGG   1149
                     |.||.|||||.|||||.||.||.||..||||.|||||||||.|.|||||.
RBAM_019130__   1100 CGGGAGAAGGCATTGTCGCCGAGACGCTGAACTTAAGCTCTCTGAAAGGC   1149

BSNT_03153___   1150 TATCAAGTAGGCGGTGCGATTCATATTATCGCCAATAACATGATCGGATT   1199
                     |||||.||.|||||.||.||||||||.|||||||||||.||||||||.||
RBAM_019130__   1150 TATCAGGTCGGCGGGGCCATTCATATCATCGCCAATAATATGATCGGCTT   1199

BSNT_03153___   1200 TACAACAGAAAGCGCTGAATCCAGATCGACAAAATATGCCAGCGACCTGG   1249
                     ||||||.|||||||.||||||..||||.||.|||||||||||.||..|||
RBAM_019130__   1200 TACAACTGAAAGCGATGAATCACGATCCACGAAATATGCCAGTGATTTGG   1249

BSNT_03153___   1250 CCAAGGGTTATGAAATTCCGATTGTTCACGTGAATGCGGACGATCCTGAA   1299
                     |.|||||.||||||||||||||.||||||||.||.|||||.|||||.|||
RBAM_019130__   1250 CGAAGGGCTATGAAATTCCGATCGTTCACGTCAACGCGGATGATCCGGAA   1299

BSNT_03153___   1300 GCTTGTCTTTCAGCTGTTAAGTTTGCGGTCGAATACCGAAAAACATTCAA   1349
                     ||.||.||.|||||.|||||.||||||||.||||||||.||....|||||
RBAM_019130__   1300 GCATGCCTGTCAGCCGTTAAATTTGCGGTTGAATACCGGAAGCGGTTCAA   1349

BSNT_03153___   1350 CAAGGATTTTCTGATTGATTTGATCGGGTACAGACGCTATGGACACAACG   1399
                     .||.|||||..|.||.|||||.||||||||||||||.||.||.|||||.|
RBAM_019130__   1350 TAAAGATTTCTTAATCGATTTAATCGGGTACAGACGGTACGGCCACAATG   1399

BSNT_03153___   1400 AAATGGATGAACCGTCAACCACTCAGCCAATGCTGTATGATGCTGTCAGA   1449
                     ||||||||||.||||||||.||.|||||.|||||||||||.||.||||||
RBAM_019130__   1400 AAATGGATGAGCCGTCAACGACACAGCCGATGCTGTATGACGCCGTCAGA   1449

BSNT_03153___   1450 AAGCATCCGACCGTCAAACAAATTTTCGCTGAAAAGCTGGTAAAAGAAGG   1499
                     ||.||.|||||.|||||.|..||.||.||.|||||.||.||||..|||||
RBAM_019130__   1450 AAACACCCGACTGTCAAGCGGATCTTTGCGGAAAAACTCGTAAGTGAAGG   1499

BSNT_03153___   1500 CGTGCTTACCGAGGAAGTCGTTCAAAACATCGAAAAATCGGTAACGAAGC   1549
                     ..||.|.|.|||||||...|..|||||||||||||...|.||.||.||.|
RBAM_019130__   1500 TCTGATCAGCGAGGAAAAAGCGCAAAACATCGAAACGGCAGTGACAAAAC   1549

BSNT_03153___   1550 GCATTGAGGATGCATATCAGAAAGTTCCGTCTAAAAAGGAACACACTGCT   1599
                     |.|||||.||.||.|||.|.||.||.||..|.|||||.|||.||.|.|..
RBAM_019130__   1550 GAATTGAAGACGCCTATAAAAAGGTGCCCGCCAAAAAAGAAGACGCCGTA   1599

BSNT_03153___   1600 TGTGAAATTGAACTTCCAGAGCCTGTATCAAACGGTTTCCCAGATGTGGA   1649
                     .|.|||||||||.|.||.||.||.||.||.||||||||.|||||.||.||
RBAM_019130__   1600 CGGGAAATTGAATTGCCGGAACCGGTGTCCAACGGTTTTCCAGACGTTGA   1649

BSNT_03153___   1650 CACTTCGATTGATTTTGATGTGCTCCGCAAGTTGAATGGCGAATTGATCA   1699
                     |||..|.|||||.||||||||.|||||||||.||||.||||||.|.||||
RBAM_019130__   1650 CACAGCCATTGACTTTGATGTTCTCCGCAAGCTGAACGGCGAACTTATCA   1699

BSNT_03153___   1700 ACTGGCCGGAGTCATTTAATGTTTTCGGCAAGCTAAAGCGCATTTTAGAA   1749
                     ||||||||||.||.|||||.||.|||||||||||.||..|.||..|.|||
RBAM_019130__   1700 ACTGGCCGGAATCTTTTAACGTGTTCGGCAAGCTGAAAAGAATCCTGGAA   1749

BSNT_03153___   1750 AGACGCGCCAAGGCGTTCGATGATGACAGAAAAGTGGAATGGTCTTTGGC   1799
                     |||||.||.||.|||||.|||||||||.|.|||||.||||||||.|||||
RBAM_019130__   1750 AGACGTGCAAAAGCGTTTGATGATGACCGTAAAGTTGAATGGTCATTGGC   1799

BSNT_03153___   1800 AGAATCACTCGCGTTTGCTTCAATTATGAAAGACGGAACACCGATTCGTT   1849
                     .|||||.||.|||||||||||.|||.||||||||||.||.|||||.||..
RBAM_019130__   1800 TGAATCGCTTGCGTTTGCTTCCATTTTGAAAGACGGCACGCCGATCCGGC   1849

BSNT_03153___   1850 TAACAGGACAGGATTCCGAGCGCGGAACGTTCGCCCAAAGAAACCTTGTG   1899
                     |.||.|||||||||||.|||||||||||||||||.|||||||||||||||
RBAM_019130__   1850 TGACCGGACAGGATTCAGAGCGCGGAACGTTCGCTCAAAGAAACCTTGTG   1899

BSNT_03153___   1900 CTTCATGACAGTGAGACGGGCAAAGAATTTG-TGCCGCTTCATCACTTAT   1948
                     ||.||||||||.||.||.||..||||||||| |||| ||.|||||||||.
RBAM_019130__   1900 CTGCATGACAGCGAAACAGGAGAAGAATTTGTTGCC-CTCCATCACTTAG   1948

BSNT_03153___   1949 CTGACTGCAGC-ACATCATTTGCTGTTCATAACAGCCCGCTGTCTGAAGG   1997
                     ..|||||| || .|.||||||.|.||.||||||||||||||.||||||||
RBAM_019130__   1949 ACGACTGC-GCTGCTTCATTTACGGTGCATAACAGCCCGCTCTCTGAAGG   1997

BSNT_03153___   1998 ATCGGTTCTCGGTTTTGAATACGGCTATAACGTGCATTCACCGGAAACGC   2047
                     ||||||||||||.||||||||.||.||.||||||.||||.||.|||||||
RBAM_019130__   1998 ATCGGTTCTCGGCTTTGAATATGGATACAACGTGTATTCGCCTGAAACGC   2047

BSNT_03153___   2048 TTGTTTTGTGGGAAGCACAGTACGGAGATTTTGCCAACGCTGCTCAAGTG   2097
                     ||||..|||||||.||.||||||||.||.|||||.||.||.||||||||.
RBAM_019130__   2048 TTGTGATGTGGGAGGCGCAGTACGGGGACTTTGCTAATGCGGCTCAAGTC   2097

BSNT_03153___   2098 TATTTTGACCAATTTATTTCTGCCGGACGCGCGAAATGGGGCCAAAAATC   2147
                     ||||||||.|||||.||.|||||.|||||.||.||||||||.||||||||
RBAM_019130__   2098 TATTTTGATCAATTCATATCTGCAGGACGGGCAAAATGGGGACAAAAATC   2147

BSNT_03153___   2148 CGGATTAGTCATGTTGCTCCCGCACGGTTACGAGGGACAGGGGCCTGAGC   2197
                     .|||.|.||||||.||||.||.|||||||||||.||.|||||.|||||.|
RBAM_019130__   2148 AGGACTGGTCATGCTGCTGCCTCACGGTTACGAAGGGCAGGGCCCTGAAC   2197

BSNT_03153___   2198 ACTCAAGCGGAAGAATCGAGCGATTCCTGCAGCTTGCAGCGGAAAACAAC   2247
                     ||||.|||||..|..|||||||.|||||||||||.||.||||||||||||
RBAM_019130__   2198 ACTCCAGCGGCCGCGTCGAGCGGTTCCTGCAGCTGGCGGCGGAAAACAAC   2247

BSNT_03153___   2248 TGGACGGTTGCCAACCTGACAAGCGCGGCACAGTATTTCCATATTTTAAG   2297
                     ||||||||.||||||||||||||.|||||.|||||||||||.||||||||
RBAM_019130__   2248 TGGACGGTGGCCAACCTGACAAGTGCGGCTCAGTATTTCCACATTTTAAG   2297

BSNT_03153___   2298 AAGACAGGCTAAAATGCTGCTTCGTGAAGAAATCAGACCGCTCGTCATTA   2347
                     ||||||.||.|||||||||||||||||.||||||.|.|||||.||.||.|
RBAM_019130__   2298 AAGACAAGCGAAAATGCTGCTTCGTGAGGAAATCCGCCCGCTTGTGATCA   2347

BSNT_03153___   2348 TGACGCCGAAGAGCCTTCTTCGCAACCCAAATACGGTGTCGGAAGTGCAG   2397
                     ||||||||||||||||.||.||||||||.||||||||.||.|||||||||
RBAM_019130__   2348 TGACGCCGAAGAGCCTGCTGCGCAACCCGAATACGGTATCTGAAGTGCAG   2397

BSNT_03153___   2398 GAGCTCAGCGAAAGCCGCTTCCAGCCTGTTTATGAACAGTCGGGACTTTC   2447
                     ||.||.|||||||||||.|||.|||||||.|||||.|||||.||.|||||
RBAM_019130__   2398 GAACTGAGCGAAAGCCGATTCAAGCCTGTCTATGAGCAGTCCGGTCTTTC   2447

BSNT_03153___   2448 TCATGACTATGAAAAAGTAACCAGACTTGTATTATCCAGCGGTAAAGTGT   2497
                     .||||..||.||||||||.||..|..|.||||||||.|||||.|||||||
RBAM_019130__   2448 CCATGCTTACGAAAAAGTGACTCGCGTCGTATTATCAAGCGGAAAAGTGT   2497

BSNT_03153___   2498 CTATAGACATTAGCGATCATTTTAATAAGTTAGAAGACGGTAAAGAGTGG   2547
                     |.||.||.||.||||||||.||.||.||..|.||||.||.|||.||.|||
RBAM_019130__   2498 CAATTGATATCAGCGATCACTTCAACAAAATGGAAGGCGATAAGGATTGG   2547

BSNT_03153___   2548 CTTCACATTGCGAGAATCGAACAGCTGTATCCATTCCCGGCAAAAGGAGT   2597
                     |||||.|||||.||||||||||||||||||||.|||||||||||| ||..
RBAM_019130__   2548 CTTCATATTGCCAGAATCGAACAGCTGTATCCGTTCCCGGCAAAA-GATA   2596

BSNT_03153___   2598 CAAAGAA--TTATTTGCAAAACTTCCGAACCTGAAAGAAATCGTTTGGGT   2645
                     |.|||.|  || ||.||.|||||.|||||||||.||||.|||||||||||
RBAM_019130__   2597 CGAAGGAGCTT-TTCGCCAAACTGCCGAACCTGCAAGAGATCGTTTGGGT   2645

BSNT_03153___   2646 GCAGGAAGAGCCGCAGAACATGGGGGCTTGGGGTTATATCAGCCCGTATT   2695
                     .||||||||||||||||||||||||||.|||.|||||||||||||||||.
RBAM_019130__   2646 TCAGGAAGAGCCGCAGAACATGGGGGCATGGAGTTATATCAGCCCGTATC   2695

BSNT_03153___   2696 TGACAGAGATTGCACCAGAGGGAGTAAGCGTTCAATATATTGGACGAAGA   2745
                     ||.|.||.||.||.|||.|.|||||||..||.|||||.||.||.||||||
RBAM_019130__   2696 TGTCGGAAATCGCGCCAAAAGGAGTAAATGTCCAATACATCGGCCGAAGA   2745

BSNT_03153___   2746 AGACGATCCAGCCCTGCAGAGGGAGATCCGACAGTTCATAAAAAAGAACA   2795
                     |||||||||||.||.|||||.||||||||||||||.||.|||||||||||
RBAM_019130__   2746 AGACGATCCAGTCCCGCAGAAGGAGATCCGACAGTCCACAAAAAAGAACA   2795

BSNT_03153___   2796 GGAACGTATTGTATCTGATAGCTTGACTCGCAAAAACTAA   2835
                     ||||||.|||||||||||||||||||||||||||||||||
RBAM_019130__   2796 GGAACGCATTGTATCTGATAGCTTGACTCGCAAAAACTAA   2835


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