Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03167 and RBAM_019220

See Amino acid alignment / Visit BSNT_03167 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence dna-align/BSNT_03167.1.9828.seq
#    -bsequence dna-align/RBAM_019220___yojG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03167-RBAM_019220___yojG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03167-RBAM_019220___yojG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03167
# 2: RBAM_019220___yojG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 669
# Identity:     546/669 (81.6%)
# Similarity:   546/669 (81.6%)
# Gaps:           6/669 ( 0.9%)
# Score: 2202.0
# 
#
#=======================================

BSNT_03167         1 ATGAAAGAACATGTACTAGTAATCCTGCCTCACCCTGATGATGAATCATA     50
                     |||||||||||||||||.||.|||||||||||||||||||||||||||||
RBAM_019220__      1 ATGAAAGAACATGTACTCGTCATCCTGCCTCACCCTGATGATGAATCATA     50

BSNT_03167        51 TGGAGTGGCAGGCCTCATTGCCTTAAACAGAAAAAAAGACATTCCCGTTA    100
                     .|||||||||||.||.|||||.|||.|||||.|||||||.||||||||||
RBAM_019220__     51 CGGAGTGGCAGGGCTGATTGCTTTACACAGACAAAAAGATATTCCCGTTA    100

BSNT_03167       101 CGTATGCCTGCGCCACTTTAGGTGAAATGGGCAGAAATATGGGCGATCCA    150
                     |||||||.|||||.||..|.||.|||||||||.|.||.|||||.|||||.
RBAM_019220__    101 CGTATGCATGCGCAACGCTTGGCGAAATGGGCCGGAACATGGGAGATCCT    150

BSNT_03167       151 TTTTTCGCGAATCGGGAAACGTTGCCGCTGCTAAGAAAACAAGAGCTCAT    200
                     |||||||||||.||.|||||..||||||||.||||||||||||||||.||
RBAM_019220__    151 TTTTTCGCGAACCGTGAAACACTGCCGCTGTTAAGAAAACAAGAGCTGAT    200

BSNT_03167       201 CAATGCTTGCAAAGAAATGGATATCAATGACCTTCGTATGCTTGGACTCC    250
                     |.|.||.|||||||.||||||..|.|.||||||..|.|||||.||.||.|
RBAM_019220__    201 CGACGCATGCAAAGCAATGGACGTTACTGACCTGAGAATGCTCGGGCTTC    250

BSNT_03167       251 GTGACAAAACGCTCGAATTTGAAGACGATGAGTATTTAGCTGATATCATG    300
                     ||||.|||||.||.|||||||||||.||.||||...|.||.|||||.|||
RBAM_019220__    251 GTGATAAAACACTTGAATTTGAAGATGACGAGTGGCTCGCGGATATGATG    300

BSNT_03167       301 GAAGAGATCATAGATGATGTAAAACCAAGTTTAATTGTCACATTTTATCC    350
                     ||||||||.||.||.|||||||||||.|||.|.|||||||||||.|| ||
RBAM_019220__    301 GAAGAGATTATCGACGATGTAAAACCGAGTCTGATTGTCACATTCTA-CC    349

BSNT_03167       351 CGGA-CACGGTGTGCACCCTGACCATGATGCATGCGGGGAAGCGGTTATC    399
                     |||| |||||.||.||.||.||.||||||||||||||.||||||||||||
RBAM_019220__    350 CGGAGCACGGCGTCCATCCGGATCATGATGCATGCGGCGAAGCGGTTATC    399

BSNT_03167       400 CGTGCATTATATCGCAAAAAGAAAGAAGACCGTCCGCGTACAATCTGCAT    449
                     .|.||..|.||..|.||.||.|||||.|||||.|||||.||..|.|||||
RBAM_019220__    400 AGAGCGCTTTACAGAAAGAAAAAAGAGGACCGCCCGCGCACGCTTTGCAT    449

BSNT_03167       450 GGCCATTACCCGCAACAGAGAAGAGGTTCTCGGCGAAG-CTGATGTCGTG    498
                     |||.||.|||||||||||.||.||.|...||||| ||| ||||||||.|.
RBAM_019220__    450 GGCAATCACCCGCAACAGGGAGGAAGCCGTCGGC-AAGCCTGATGTCATT    498

BSNT_03167       499 CTTGATATCAAAGAAGTAGCTGATATTAAAATGAATGCGTTAAGAGCTCA    548
                     ||||||||.|||||.||.||.|||||||||||||||||.||||.|||.||
RBAM_019220__    499 CTTGATATTAAAGAGGTTGCCGATATTAAAATGAATGCCTTAAAAGCGCA    548

BSNT_03167       549 CCGCACACAAACAGAAGGCATGCTCAGAGAGCTTGAAGAGAAATTGAAAA    598
                     ||||||.|||||.|||||||||||.||||||||.|||||.|||.|.||||
RBAM_019220__    549 CCGCACCCAAACGGAAGGCATGCTGAGAGAGCTGGAAGAAAAAATAAAAA    598

BSNT_03167       599 ATAATGAACCTGTTATGGCA-ACATGGTTTGAAGAAGAAATATATTGGAC    647
                     ||||.||.||.|||.| .|| ||||||||||||||||||.|.||||||||
RBAM_019220__    599 ATAACGAGCCGGTTCT-TCAGACATGGTTTGAAGAAGAAGTGTATTGGAC    647

BSNT_03167       648 GTATCAATGGAATGATTAA    666
                     .||||..|||||.||.|.|
RBAM_019220__    648 ATATCCGTGGAAAGACTGA    666


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