Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06150 and RBAM_019370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:37
# Commandline: needle
# -asequence dna-align/BSNT_06150___yydK.1.9828.seq
# -bsequence dna-align/RBAM_019370___yydK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06150___yydK-RBAM_019370___yydK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06150___yydK-RBAM_019370___yydK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06150___yydK
# 2: RBAM_019370___yydK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 746
# Identity: 520/746 (69.7%)
# Similarity: 520/746 (69.7%)
# Gaps: 55/746 ( 7.4%)
# Score: 1801.5
#
#
#=======================================
BSNT_06150___ 1 ATGTTAAAATACCAGCAAATCGCAGCGGAAATTGAAACATATATAGAAGA 50
|||||||||||||||||||||||....||.|||||||.|||.||||||||
RBAM_019370__ 1 ATGTTAAAATACCAGCAAATCGCGATAGATATTGAAAAATACATAGAAGA 50
BSNT_06150___ 51 ACACCAGCTTCAGCAGGGAGACAAACTGCCAGTCCTGGAAACCCTCATGG 100
|||.|||||.|||||.||.||.||||||||.||.|||.|||||.|.|||.
RBAM_019370__ 51 ACATCAGCTGCAGCAAGGGGATAAACTGCCTGTGCTGCAAACCTTAATGA 100
BSNT_06150___ 101 CCCAGTTTGAAGTCAGCAAAAGCACAATTACAAAGTCCCTCGAGCTATTA 150
.||.||||.|.||.|||||||||||.||.||.||||||.|.||..|||||
RBAM_019370__ 101 GCCGGTTTAACGTGAGCAAAAGCACGATCACCAAGTCCTTAGATTTATTA 150
BSNT_06150___ 151 GAGCAAAAAGGCGCGA---TCTTTCAAGTCAGAGGAAGCGGCATTTTCGT 197
||..||||.|| || |.||||||||.||.||||||||||||||.||
RBAM_019370__ 151 GAAAAAAAGGG---GATTGTGTTTCAAGTGAGGGGAAGCGGCATTTTTGT 197
BSNT_06150___ 198 CAGAAAACATAAACGAAAAGGCTATATCAGCCTTCTGTCGAATCAGGGGT 247
||||....|||||.|||||||.||||||||.||.||.||.||||||||.|
RBAM_019370__ 198 CAGACGGAATAAAAGAAAAGGGTATATCAGTCTGCTTTCTAATCAGGGAT 247
BSNT_06150___ 248 TTAAAAAAGATCTCGAGGATTTCAACGTCACCTCAAAAGTCATCGAACTG 297
|||||.||...||.||.|||||.||.|||||.||.|||.|..|.|..|||
RBAM_019370__ 248 TTAAAGAATCACTTGAAGATTTTAATGTCACTTCCAAATTATTAGCGCTG 297
BSNT_06150___ 298 GACGTGAGAAAGCCGACACCGGAAGCGGCGGAAAATCTGAACAT------ 341
||.||||||||.||.||.||.||.||.||..||||||||||.||
RBAM_019370__ 298 GAAGTGAGAAAACCCACGCCTGAGGCTGCCCAAAATCTGAATATGCCGCC 347
BSNT_06150___ 342 CGAAATAAACGAAGACATCTACTATGTCAAAAGGGTCCGCTACATCAACG 391
.| |||..|||.|.||.||||||||..|..||||.||.||..|||
RBAM_019370__ 348 TG------ACGGCGACGTGTATTATGTCAAGCGAATCCGATATATTGACG 391
BSNT_06150___ 392 GCCAGACCCTTTGCTA-CGAAGAATCCTATTACAACAAATCCATCGTGAC 440
|.|.|||..|.|| || ||||||.||.|.||||||||||||.||..|.||
RBAM_019370__ 392 GGCTGACATTGTG-TATCGAAGAGTCATTTTACAACAAATCGATTATTAC 440
BSNT_06150___ 441 GTATTTAAACAACGAAATCGTTTCCCACTCCATCTTCCATTACATCCGGG 490
||||||.||.||.||.|||||..|..|.||.||.||..||||.||.||.|
RBAM_019370__ 441 GTATTTGAATAAAGAGATCGTGGCAGAATCAATATTTGATTATATTCGAG 490
BSNT_06150___ 491 AAGGACTGGGGTTGAAGATTGGTTTTTCTGATTTGTTTCTGCACGTGGGC 540
||||.||.|||||.|||...||||||||.|||||.|.||||.|||.|||.
RBAM_019370__ 491 AAGGTCTCGGGTTAAAGCGCGGTTTTTCAGATTTATATCTGTACGCGGGG 540
BSNT_06150___ 541 CAGCTTAATGAGGAAGAAGCGGAATATTTGGG----ATTAGAGGCTGGAC 586
..|.|.|||||||||||||||||.||.||.|| .||| |.|||.
RBAM_019370__ 541 ATGTTAAATGAGGAAGAAGCGGAGTACTTAGGTCTATTTA----CAGGAG 586
BSNT_06150___ 587 TGCCGAAGCTGTATATAGAAAGTATTTTTCACCTGACAAATGGGCAGCCG 636
.|||.|||||.|...|.||||..||||||||..|.||.||.||.||||||
RBAM_019370__ 587 CGCCTAAGCTATGCGTTGAAACGATTTTTCATTTAACCAACGGCCAGCCG 636
BSNT_06150___ 637 TTTGATTACTCGAAGATTTCGTATAATTATGAGCAGTCGCAGTTTGTGGT 686
|||||.|.|||.||..|..|.|||.|.||||||||.||.||||||.|..|
RBAM_019370__ 637 TTTGACTTCTCAAAAGTCACCTATCACTATGAGCAATCACAGTTTTTCAT 686
BSNT_06150___ 687 GCAGGCTAATAG-----TTTTTTATTGTGA---------------- 711
.|||||.||.|| |||| |||
RBAM_019370__ 687 TCAGGCGAACAGCCACCTTTT------TGAACAGGAAACGACATAA 726
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