Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03206 and RBAM_019460

See Amino acid alignment / Visit BSNT_03206 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:15
# Commandline: needle
#    -asequence dna-align/BSNT_03206___yozD.1.9828.seq
#    -bsequence dna-align/RBAM_019460___yozD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03206___yozD-RBAM_019460___yozD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03206___yozD-RBAM_019460___yozD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03206___yozD
# 2: RBAM_019460___yozD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 178
# Identity:     147/178 (82.6%)
# Similarity:   147/178 (82.6%)
# Gaps:           5/178 ( 2.8%)
# Score: 621.0
# 
#
#=======================================

BSNT_03206___      1 ATGAAAGAAATAGATCTTGTGATTGATACGGAAGAAATCGCTGAATTTTT     50
                     ||||||||||||||||||||||||||.||.||||||||.|||||.|.|||
RBAM_019460__      1 ATGAAAGAAATAGATCTTGTGATTGACACAGAAGAAATAGCTGATTATTT     50

BSNT_03206___     51 TTACAGAGAGCTTGCAAGACGGGGCTACATACCGAGTGAGGATGAGCTGT    100
                     ||||||..|||||||.|..||.||.||||||||||||||.||.||..|.|
RBAM_019460__     51 TTACAGTCAGCTTGCTATGCGCGGGTACATACCGAGTGAAGAGGAAATCT    100

BSNT_03206___    101 TTGAAATCGCTGATATCACCTTTGATTATTTGATAGAAAAATGTATGATA    150
                     |.|||||.||.||.|||||||||||||||||..|||||||||||||||||
RBAM_019460__    101 TCGAAATAGCCGACATCACCTTTGATTATTTATTAGAAAAATGTATGATA    150

BSNT_03206___    151 AATGAAGAGCTGGATGAAGA-TGAGTGA    177
                     .|.||||||||.|||||||| |||    
RBAM_019460__    151 GACGAAGAGCTTGATGAAGACTGA----    174


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