Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06255 and RBAM_019580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:42
# Commandline: needle
# -asequence dna-align/BSNT_06255___yosT.1.9828.seq
# -bsequence dna-align/RBAM_019580___yosT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06255___yosT-RBAM_019580___yosT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06255___yosT-RBAM_019580___yosT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06255___yosT
# 2: RBAM_019580___yosT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 173/450 (38.4%)
# Similarity: 173/450 (38.4%)
# Gaps: 234/450 (52.0%)
# Score: 693.0
#
#
#=======================================
BSNT_06255___ 1 TTGAAAATAACTATTGAAGAATTACCTGAATCAAGGATTGCTTATTTCAG 50
RBAM_019580__ 0 -------------------------------------------------- 0
BSNT_06255___ 51 AAATGTTGGGGAGTACGGTGAAAAGCAAAACAAAGAATTAATGGAGACTT 100
RBAM_019580__ 0 -------------------------------------------------- 0
BSNT_06255___ 101 TTAAAAAGTGGGCAAAATTGAATGATGTATTTGATAATTCTACAATTTTA 150
RBAM_019580__ 0 -------------------------------------------------- 0
BSNT_06255___ 151 GGCATACCGCAAGATAACCCAGAGATTACTCCTAAAGAGGAATGTCGTTA 200
RBAM_019580__ 0 -------------------------------------------------- 0
BSNT_06255___ 201 TGATGTTTGTGTTGTTATAAATAAAGATTTGAATGTGAAAAAACCAGCTC 250
|||....|||||||.|
RBAM_019580__ 1 ----------------------------------GTGCCTGAACCAGCCC 16
BSNT_06255___ 251 ATGTTGGAGAATTTTCTGGTGGGAAATATGCTGTTTTCTTGCTTGACCAT 300
...|.||...||||||.||.|||||.||.|||||||||||||||||.|||
RBAM_019580__ 17 GGATCGGTACATTTTCCGGAGGGAAGTACGCTGTTTTCTTGCTTGATCAT 66
BSNT_06255___ 301 ACAAAAGAGGCAGTCAGAGACTTTTGGGGCAATATTTCTTCTGAGATAGA 350
|||||||||||||||||.|..||||||..||.|.|||.|||||||||.||
RBAM_019580__ 67 ACAAAAGAGGCAGTCAGTGGATTTTGGAACACTGTTTTTTCTGAGATCGA 116
BSNT_06255___ 351 AAGAAATAATCTATCAATAAGAGAACAACCAATTATAGAAAGATATACTC 400
||.|||||||.|||||||.||||||||.||.|||||.|||||.||||||.
RBAM_019580__ 117 AAAAAATAATTTATCAATCAGAGAACAGCCCATTATCGAAAGGTATACTT 166
BSNT_06255___ 401 CACAAATGATTGATAATCATTTGTGTGAAATATTAATTCCTATACAGTAA 450
.|||||.|.|..||.|||||||||||||||.|||.|||||.|||||||||
RBAM_019580__ 167 TACAAAAGGTGAATCATCATTTGTGTGAAAAATTGATTCCCATACAGTAA 216
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