Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03237 and RBAM_019870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:21
# Commandline: needle
# -asequence dna-align/BSNT_03237___ypoP.1.9828.seq
# -bsequence dna-align/RBAM_019870___ypoP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03237___ypoP-RBAM_019870___ypoP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03237___ypoP-RBAM_019870___ypoP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03237___ypoP
# 2: RBAM_019870___ypoP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 430
# Identity: 347/430 (80.7%)
# Similarity: 347/430 (80.7%)
# Gaps: 8/430 ( 1.9%)
# Score: 1402.5
#
#
#=======================================
BSNT_03237___ 1 TTGAAAGTAAGAACACAGATGATGTACGATATGGAAACTTTACTCCGTAA 50
|||||||||||.|||||.||||||||.|||||||||.||||.||.||.||
RBAM_019870__ 1 TTGAAAGTAAGGACACAAATGATGTATGATATGGAAGCTTTGCTTCGAAA 50
BSNT_03237___ 51 AGTCTTTAAACAAATACGCAATGAAATCAATGAAATTTTAGATAAAGAGC 100
|||.|||||||||||..|.||||||.|.|||||||||.||||||||||||
RBAM_019870__ 51 AGTGTTTAAACAAATCAGAAATGAAGTTAATGAAATTCTAGATAAAGAGC 100
BSNT_03237___ 101 TGTCGCGGAATGAATTCACCATTCTTCGGATCCTCAGTGAACAAGGGCCT 150
||||..||||||||||.|.||||.|.|||||.||||||||||||||.|||
RBAM_019870__ 101 TGTCCAGGAATGAATTTATCATTTTGCGGATTCTCAGTGAACAAGGACCT 150
BSNT_03237___ 151 AAAAAAGTCACTGAATTTGCGCCTATTTTAGAGGTATCGGCAAGCCACAT 200
||||||||.||.|||||.||.||.|||.|.|||||.||.|||||||||||
RBAM_019870__ 151 AAAAAAGTAACGGAATTCGCCCCCATTCTTGAGGTCTCCGCAAGCCACAT 200
BSNT_03237___ 201 TACGGCTGTGACCGATGCGCTGGTAGAAAAGGAATGGATTACGAGAATCA 250
|||.||.||||||||.||..|.|||||||||||||||||.||..|.|||.
RBAM_019870__ 201 TACCGCAGTGACCGACGCTTTAGTAGAAAAGGAATGGATCACCCGCATCC 250
BSNT_03237___ 251 GATCGAAGGAAGACAGACGCATCATCCGCATTCATATCACTGAAGCGGGC 300
|.||.||.||.||||||||.||.|||.|.||.|||||.||.|||||.||.
RBAM_019870__ 251 GTTCCAAAGAGGACAGACGAATTATCAGAATCCATATTACGGAAGCCGGG 300
BSNT_03237___ 301 GAAAAA---GTCCTTCAGCACTTT-AACGAGAAAAAAACGGAATATTTCT 346
||.||| |||..||| ||| |||.||||||||||.|||||.||.|
RBAM_019870__ 301 GAGAAAATTGTCGATCA----TTTCAACCAGAAAAAAACAGAATACTTTT 346
BSNT_03237___ 347 TTAAACGCTTTGACTGCTACACTGATGCTGAACTTGCCACGTTAATCGAG 396
|||||||.||||||||||||.||||||..||.||.||.|||||||||.|.
RBAM_019870__ 347 TTAAACGGTTTGACTGCTACTCTGATGAAGAGCTCGCAACGTTAATCAAA 396
BSNT_03237___ 397 CTCTTCAGCAAACTTGATAAAAAACGGTGA 426
||.||||||||.||.|||||||||||.|||
RBAM_019870__ 397 CTGTTCAGCAAGCTGGATAAAAAACGCTGA 426
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