Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03278 and RBAM_020140

See Amino acid alignment / Visit BSNT_03278 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence dna-align/BSNT_03278___sspL.1.9828.seq
#    -bsequence dna-align/RBAM_020140___sspL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03278___sspL-RBAM_020140___sspL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03278___sspL-RBAM_020140___sspL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03278___sspL
# 2: RBAM_020140___sspL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 130
# Identity:     102/130 (78.5%)
# Similarity:   102/130 (78.5%)
# Gaps:           2/130 ( 1.5%)
# Score: 386.0
# 
#
#=======================================

BSNT_03278___      1 ATGA-AAAAGAAAGATAAAGGCCGGCTGACCGGCGGTGTTACTCCGCAAG     49
                     |||| |||||||| ||||||||.||||||||||.||.||.|.|||.||.|
RBAM_020140__      1 ATGAGAAAAGAAA-ATAAAGGCAGGCTGACCGGGGGCGTGAATCCTCAGG     49

BSNT_03278___     50 GCGACCTGGAAGGCAAAACACATAATGACCCTAAAACAGAGCTTGAGGAG     99
                     |..|..|||||||.||..|.||.||.|||||.|||.|||..|||||..|.
RBAM_020140__     50 GAAATATGGAAGGAAATGCGCACAAAGACCCGAAATCAGCCCTTGAAAAC     99

BSNT_03278___    100 AGAGCAAAAAAAAGCAATACAAAACGCTAG    129
                     |..|||||||||||||||||||||||||||
RBAM_020140__    100 AACGCAAAAAAAAGCAATACAAAACGCTAG    129


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