Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03300 and RBAM_020290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence dna-align/BSNT_03300___yptA.1.9828.seq
# -bsequence dna-align/RBAM_020290___yptA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03300___yptA-RBAM_020290___yptA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03300___yptA-RBAM_020290___yptA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03300___yptA
# 2: RBAM_020290___yptA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 197
# Identity: 137/197 (69.5%)
# Similarity: 137/197 (69.5%)
# Gaps: 10/197 ( 5.1%)
# Score: 404.0
#
#
#=======================================
BSNT_03300___ 1 ATGCTGAACAGCGAACATTTTAATCTTATTCAAAGGGCGCTTGACGCAAC 50
||||||||||||||.||.||.|.|...||.||||.||||.|.||||||||
RBAM_020290__ 1 ATGCTGAACAGCGAGCACTTCAGTAAAATACAAAAGGCGTTAGACGCAAC 50
BSNT_03300___ 51 AGCAAACGAGCTGAAGG-AGCTCGGGACTGA-TTCGTCTCCGTCTGTGAT 98
.||...|..||||.||| ||| |||..|.|| |||| .|||.||.|..||
RBAM_020290__ 51 TGCTTTCCGGCTGGAGGAAGC-CGGAGCGGAGTTCG-GTCCTTCCGCCAT 98
BSNT_03300___ 99 TTCGCATGCGCA--AACTGATTTAGAAAAAGCGGTAGAACATATTTATTC 146
..|.||.||.|| || ||..|.|||||.||||||.||||||...||||
RBAM_020290__ 99 GACACACGCACAGGAA--GAACTTGAAAATGCGGTAAAACATACACATTC 146
BSNT_03300___ 147 AACAGACCATCCTTTTTTATCGT-CGCATGTGATCAATCGTAAGTAA 192
||||||||||||.||..||| || |.|||.|.||.||.||.||.|.|
RBAM_020290__ 147 AACAGACCATCCGTTCCTAT-GTACACATATCATTAACCGGAAATGA 192
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