Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03329 and RBAM_020490

See Amino acid alignment / Visit BSNT_03329 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:30
# Commandline: needle
#    -asequence dna-align/BSNT_03329___nth.1.9828.seq
#    -bsequence dna-align/RBAM_020490___nth.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03329___nth-RBAM_020490___nth.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03329___nth-RBAM_020490___nth.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03329___nth
# 2: RBAM_020490___nth
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 660
# Identity:     535/660 (81.1%)
# Similarity:   535/660 (81.1%)
# Gaps:           0/660 ( 0.0%)
# Score: 2175.0
# 
#
#=======================================

BSNT_03329___      1 GTGTTAAATCTAAAACAAATTGAATTCTGTTTAGACAAGATAGGTGACAT     50
                     |||||||||.||||.||.|||||||..|||.|.||.||.||.||.||.||
RBAM_020490__      1 GTGTTAAATTTAAAGCAGATTGAATATTGTCTTGAAAAAATCGGCGATAT     50

BSNT_03329___     51 GTTTCCTCATGCGGAGTGTGAACTGGTTCATTCCAATCCTTTTGAATTAG    100
                     ||||||.||.||.||.||||||||.||.|||||.||||||||.|||||.|
RBAM_020490__     51 GTTTCCGCACGCAGAATGTGAACTTGTCCATTCAAATCCTTTCGAATTGG    100

BSNT_03329___    101 TGGTGGCTGTTGCTTTATCTGCGCAATGTACAGATGCACTTGTAAACAGA    150
                     |.|||||.||.||.|||||.|||||||||||.|||||.||.||.||||||
RBAM_020490__    101 TTGTGGCAGTCGCATTATCCGCGCAATGTACGGATGCTCTCGTCAACAGA    150

BSNT_03329___    151 GTGACCAAAACATTATTCCAAAAATATAAACGGCCGGAAGACTATTTGGC    200
                     |||||.|||||..||||.|||||||||||||||||.|||||.|||.|.||
RBAM_020490__    151 GTGACAAAAACGCTATTTCAAAAATATAAACGGCCCGAAGATTATCTTGC    200

BSNT_03329___    201 TGTTCCGCTGGAAGAGCTTCAGCAGGATATTAAATCAATCGGTTTATATC    250
                     .||..||||||||||.||.|||||||||||||||||||||||..|.||.|
RBAM_020490__    201 CGTATCGCTGGAAGAACTCCAGCAGGATATTAAATCAATCGGCCTGTACC    250

BSNT_03329___    251 GTAATAAAGCGAAAAATATTCAAAAGCTGAGTAAAATGATTATTGAAGAT    300
                     ||||||||||.||||||||||||||||||||.||||||||.||.|||||.
RBAM_020490__    251 GTAATAAAGCCAAAAATATTCAAAAGCTGAGCAAAATGATCATCGAAGAG    300

BSNT_03329___    301 TACGGCGGAGAAGTGCCGAGAGACCGCGATGAGCTTGTCAAACTGCCAGG    350
                     |||||||||||||||||||.||||||.|||||||||||.||.|||||.||
RBAM_020490__    301 TACGGCGGAGAAGTGCCGAAAGACCGGGATGAGCTTGTGAATCTGCCGGG    350

BSNT_03329___    351 GGTCGGGAGAAAGACCGCAAACGTAGTGGTATCCGTTGCGTTTGGCGTGC    400
                     .|||||..|.||.||.|||||.||.||.||.||.|||||.||.|||||.|
RBAM_020490__    351 TGTCGGACGGAAAACGGCAAATGTGGTCGTGTCTGTTGCTTTCGGCGTAC    400

BSNT_03329___    401 CGGCCATAGCCGTAGATACCCATGTGGAGAGAGTCAGCAAACGATTGGGC    450
                     |.||.||.||.|||||.||.|||||||||.|.|||...|||||..|.||.
RBAM_020490__    401 CTGCGATTGCAGTAGACACTCATGTGGAGCGGGTCTCTAAACGGCTCGGT    450

BSNT_03329___    451 ATTTGCCGGTGGAAGGACTCGGTTCTGGAAGTTGAAAAGACGCTGATGCG    500
                     ||.|||||.|||||||||||.|||.|||||||.||.||.||..|.|||..
RBAM_020490__    451 ATCTGCCGCTGGAAGGACTCTGTTTTGGAAGTAGAGAAAACATTAATGAA    500

BSNT_03329___    501 CAAGGTTCCCAAAGAAGATTGGTCCGTTACGCATCACCGGCTTATTTTCT    550
                     .||.||.||.|||||.||||||||.||||||||||||.|..|.||.||.|
RBAM_020490__    501 AAAAGTGCCGAAAGAGGATTGGTCTGTTACGCATCACAGATTAATATTTT    550

BSNT_03329___    551 TCGGCAGATATCACTGTAAAGCCCAATCTCCGCGCTGTGCGGAGTGTCCG    600
                     |||||||.|||||.||||||||.||||||||.|||||||||||.|||||.
RBAM_020490__    551 TCGGCAGGTATCATTGTAAAGCGCAATCTCCCCGCTGTGCGGAATGTCCT    600

BSNT_03329___    601 CTGCTTTCTTTGTGCAGAGAAGGGCAGAAGAGGGATAAAAAAGGACTGGT    650
                     .|||||.|..||||||||||||||||||||.|.||.||||||||.|||||
RBAM_020490__    601 TTGCTTCCGCTGTGCAGAGAAGGGCAGAAGCGTGACAAAAAAGGGCTGGT    650

BSNT_03329___    651 GAAACGATGA    660
                     ||||||.|||
RBAM_020490__    651 GAAACGGTGA    660


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