Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03358 and RBAM_020740
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:33
# Commandline: needle
# -asequence dna-align/BSNT_03358___ypiB.1.9828.seq
# -bsequence dna-align/RBAM_020740___ypiB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03358___ypiB-RBAM_020740___ypiB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03358___ypiB-RBAM_020740___ypiB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03358___ypiB
# 2: RBAM_020740___ypiB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 541
# Identity: 449/541 (83.0%)
# Similarity: 449/541 (83.0%)
# Gaps: 2/541 ( 0.4%)
# Score: 1865.0
#
#
#=======================================
BSNT_03358___ 1 ATGCAGACCCCTGTTTCTGTCAATGAGAAAAAAGATTTTATCCGTTGGTT 50
||||||||||||||||||||||||||.|||||.|||||||||||||||||
RBAM_020740__ 1 ATGCAGACCCCTGTTTCTGTCAATGAAAAAAAGGATTTTATCCGTTGGTT 50
BSNT_03358___ 51 TTTAAACCATTATCAG-TTAAAGCGCCGAGAGTGCGTTTGGATCTTGAAC 99
||||||.||||||||| ||||| |||||.||||||||.|||||.||.||.
RBAM_020740__ 51 TTTAAATCATTATCAGCTTAAA-CGCCGGGAGTGCGTCTGGATTTTAAAT 99
BSNT_03358___ 100 TACTTAATGAGCCATGATTCTCTCATGGAGAAGGTTCATTTTGTGGAGCA 149
||.||||||||.|||||||||.|.|||||.||.||.||||||||.||.||
RBAM_020740__ 100 TATTTAATGAGTCATGATTCTTTAATGGAAAAAGTCCATTTTGTAGAACA 149
BSNT_03358___ 150 GGCTGAATTTTGCCCGAGAGGCATTATAATGTCAACACATTGTGTTGAAG 199
.||.||||||||||||.||||||||||.|||||.||.|||||.|||||.|
RBAM_020740__ 150 AGCCGAATTTTGCCCGCGAGGCATTATCATGTCTACTCATTGCGTTGATG 199
BSNT_03358___ 200 AAGTTCCGTTCCGGTTCTATAAAGAGAATGTCATGACTACCGACGCGGAA 249
|.||.|||||..||||.||.|||||.||||||||||||||.|||||||||
RBAM_020740__ 200 AGGTGCCGTTTAGGTTTTACAAAGAAAATGTCATGACTACGGACGCGGAA 249
BSNT_03358___ 250 AAATCTTTTCATGATATTAGATTAAATAAACAGCAGGATTTGTTTATCCA 299
|||||||||||.||.||..|.||||||||||||||||||||.||||||||
RBAM_020740__ 250 AAATCTTTTCACGACATCCGGTTAAATAAACAGCAGGATTTATTTATCCA 299
BSNT_03358___ 300 GCTTAATTTCCGTTCGGCTTACAGCTCACCTGAATATGCGGCGGTGCTGG 349
|||.||||||||||||||.|||||||||||.||||||||.||.||.||.|
RBAM_020740__ 300 GCTGAATTTCCGTTCGGCCTACAGCTCACCGGAATATGCCGCTGTTCTTG 349
BSNT_03358___ 350 AGTCCAACCCGCATATTCCGAAAAACCTTTTTGAGAATAAAAAAGATCAG 399
|.||.||.||||||.|.||||||.||||.|||||.||||||.|.||||||
RBAM_020740__ 350 AATCAAATCCGCATCTGCCGAAAGACCTGTTTGAAAATAAACAGGATCAG 399
BSNT_03358___ 400 GGATTGGCGGAACAGATTTTAGAGCACGCTATTTCCACATTCCAAAGAGA 449
||..||||.|||.|.||.|||||.|||||.||||||||.|||||..|.||
RBAM_020740__ 400 GGGATGGCCGAAAAAATATTAGAACACGCCATTTCCACTTTCCAGCGGGA 449
BSNT_03358___ 450 AAAATTATTAAAAGACATTGACGACGCGTTAGATCGTCATGATAAAGAGG 499
|||..|..|.|||||.||.|||||.|||.|.||.||.||.||.|||||..
RBAM_020740__ 450 AAAGCTGCTTAAAGATATCGACGAGGCGCTGGACCGCCACGACAAAGAAA 499
BSNT_03358___ 500 CATTTGAACAATTATCGCGCCAATTAAATCAGCTCACATAA 540
||||||||.|..|.||.||||||||.|||||||||||||||
RBAM_020740__ 500 CATTTGAAAAGCTTTCCCGCCAATTGAATCAGCTCACATAA 540
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